Sequence 1: | NP_523719.1 | Gene: | Iswi / 36390 | FlyBaseID: | FBgn0011604 | Length: | 1027 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001004446.1 | Gene: | Smarca2 / 361745 | RGDID: | 1302988 | Length: | 1597 | Species: | Rattus norvegicus |
Alignment Length: | 1192 | Identity: | 342/1192 - (28%) |
---|---|---|---|
Similarity: | 542/1192 - (45%) | Gaps: | 316/1192 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 EKEAEFDNKIEADRSRRFDFLLKQTE---------IFTHFMTNSAKSPTKPKGRPKKIKD----- 80
Fly 81 -----------------------------------------------------------KDKEKD 86
Fly 87 VADHRHRKTEQE----EDEELLAEDSATKEIFRFDA----------------------------- 118
Fly 119 -----------SPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKH 172
Fly 173 FKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEM 237
Fly 238 CIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILR-EFKTANRLLITGTPLQNNLHELWALLNF 301
Fly 302 LLPDVFNSSEDFDEWFNTNTCLGDD----------ALITRLHAVLKPFLLRRLKAEVEKRLKPKK 356
Fly 357 EMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMR-----LQNILMQLRKCTNHPYLFDGAEP 416
Fly 417 GPPYTTDTHLVYN------------SGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHW 469
Fly 470 RNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMD 534
Fly 535 LQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEML 599
Fly 600 NIIRFGANQVFSSKETDITDED------------------IDVILERGEAKTAEQKAALDSLGES 646
Fly 647 SLRTFTMDTNGEAGTSSVYQFEGEDWREKQKLNALGNWIEPPKRERKANYAVDAYFREALRVSEP 711
Fly 712 KAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKID 776
Fly 777 EAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAV 841
Fly 842 ------FWERCTELQDIERI--MGQIERGEGKIQRRLS-------IKKALDQKMSRYRAP--FHQ 889
Fly 890 LRLQYGNNKGKNYTEIE-DRFLVCMLHK---LGFDKENVYEE---LRAAIRASPQFRFDWFIKSR 947
Fly 948 TALELQRRCNTLITLIERENIELEEKERAEKK---------KKAPKGSVSAGSGSASSNTPAPAP 1003
Fly 1004 -------QPKASQKRKSEVVAT 1018 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Iswi | NP_523719.1 | DBINO | <30..67 | CDD:290603 | 11/45 (24%) |
SNF2_N | 131..411 | CDD:278600 | 133/295 (45%) | ||
DEXDc | 148..287 | CDD:238005 | 60/139 (43%) | ||
HELICc | 422..553 | CDD:238034 | 74/142 (52%) | ||
HAND | 697..796 | CDD:286232 | 11/98 (11%) | ||
SANT | 797..838 | CDD:197842 | 5/40 (13%) | ||
SANT | 799..838 | CDD:238096 | 5/38 (13%) | ||
SLIDE | 853..965 | CDD:286233 | 25/129 (19%) | ||
Smarca2 | NP_001004446.1 | QLQ | 173..207 | CDD:286024 | |
HSA | 443..515 | CDD:214727 | |||
BRK | 597..639 | CDD:197800 | 0/41 (0%) | ||
SNF2_N | 734..1029 | CDD:278600 | 133/295 (45%) | ||
DEXDc | 751..890 | CDD:238005 | 60/139 (43%) | ||
Helicase_C | 1056..1171 | CDD:278689 | 66/114 (58%) | ||
SnAC | 1266..1333 | CDD:291293 | 18/88 (20%) | ||
Bromodomain | 1340..>1426 | CDD:295360 | 17/144 (12%) | ||
Bromo_SNF2L2 | 1389..1513 | CDD:99947 | 26/136 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |