DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iswi and Etl1

DIOPT Version :10

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:703 Identity:235/703 - (33%)
Similarity:342/703 - (48%) Gaps:136/703 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ENSNETTSDAATS-----SSGEKEAEFDNKIEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKG 73
            :|.:....|...|     .|.:.::|...|:...|.:.|.|:.:.:.|    ...|.|:.::.|.
  Fly   150 DNDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVFQFMNEASLI----ELQSVKTLSEKKA 210

  Fly    74 RPKKIKDKDKEKDVADHRHRKTEQEEDEELL--AEDSATKE-------------IFRFDAS---- 119
              ..|.|.....|.:|.|.:........:||  |::...|:             :.|.:.:    
  Fly   211 --LAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVSRLEKAISNG 273

  Fly   120 ------PAYIKSG-EMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQA 177
                  |..:.|| ::.||||.||||:..:::..:|||||||||||||:|.|:.|.|||......
  Fly   274 AGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQ 338

  Fly   178 GPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQD----TRNTFIRDVLMPGEWDVCVTSYEM- 237
            ..|:::||.|||.||..|..:|||.|......|.||    .|..|.:|...  .:||.:|:|.: 
  Fly   339 AAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFT--GFDVLLTTYHIV 401

  Fly   238 --CIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLN 300
              ...|:.:|:.....|::.||||.:||..::....|.......|:|:|||||||||.||.:||.
  Fly   402 GSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLC 466

  Fly   301 FLLPDVF-NSSEDFDEWF-NTNTCLGD--------DALITRLHAVLKPFLLRRLKAEVEKRLKPK 355
            |::|..| .|.||....| ......||        :..|.|...::|||:|||||.:|.|.|..|
  Fly   467 FVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKK 531

  Fly   356 KEMKIFVGLSKMQRDWYTKVLLKDIDVV-NGAGKV----EKMRLQNILMQLRKCTNHPYLFDGAE 415
            ..:...|.:|..|:.:|.::    :|.. |..|:|    |:..:. |:|::|:..|||.|.    
  Fly   532 LSLVEKVPMSSQQKIYYHEL----VDYYSNNKGEVCSSSERAGIA-IMMEMRRIANHPLLM---- 587

  Fly   416 PGPPYTTDTHL--------------------------------VY-------------------N 429
              ..|.||.:|                                ||                   :
  Fly   588 --RHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICD 650

  Fly   430 SGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFN 494
            |||...||.|||||:.:|.|||:|||.|.||||:|:|...|.:.:|||||.|....|...|.:||
  Fly   651 SGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFN 715

  Fly   495 MDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITES 559
            .|:|. |:|:|||:|||:||||..||..:|:|.|:||..|.||.||.||:||::.|.::|||:||
  Fly   716 GDDSI-FVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISES 779

  Fly   560 TVEEKIVERAEVKLRLDKMVI--QGGRLVDNR--------SNQLNKD--EMLN 600
            |:||.|:..||.||:|:|.:.  :.|.:.:.|        :..|:||  |.||
  Fly   780 TIEEGILMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEEQLN 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 PLN03142 46..967 CDD:215601 228/666 (34%)
Etl1NP_609320.2 ComEA <192..233 CDD:441164 9/46 (20%)
HepA <276..795 CDD:440319 202/532 (38%)

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