DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iswi and smarca5

DIOPT Version :9

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001075098.2 Gene:smarca5 / 282615 ZFINID:ZDB-GENE-021125-1 Length:1035 Species:Danio rerio


Alignment Length:1047 Identity:754/1047 - (72%)
Similarity:875/1047 - (83%) Gaps:50/1047 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKTDTA--AVEATEENSNETTSDAATSSSGEKEAE-----------FDNKIEADRSRRFDFLLKQ 53
            |:.|.|  |.:.|.||.::..||.|..|..:..:.           ::.|::.||:.||::||||
Zfish    17 SQLDPAGPAEDDTSENGHDEASDTAMDSEAQSSSPPSAKGKDLLGGYEEKVQTDRTNRFEYLLKQ 81

  Fly    54 TEIFTHFMTNSA-KSPTKP----KGRPKKIKDKDKEK--DVADHRHRKTEQEEDEELLAEDS-AT 110
            ||:|.||:..:| |:||.|    .||| :||..:|:.  ...|:|||:||||||||||:|:| ||
Zfish    82 TEVFAHFIQPAAQKTPTSPLKMKPGRP-RIKKDEKQNLLSAGDNRHRRTEQEEDEELLSENSKAT 145

  Fly   111 KEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKN 175
            ....|||.||:|:|:|::||||:|||||:||||||||||||||||||||||||||||||:||::|
Zfish   146 SVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN 210

  Fly   176 QAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIR 240
            ..|||:|:||||||.||:||||:|.|||:|||||||::.|..||||.|:|||||||||||||.|.
Zfish   211 IPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLII 275

  Fly   241 EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPD 305
            |::||||||||||||||||||||||||||||:|||||.||||:||||||||||||||||||||||
Zfish   276 ERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPD 340

  Fly   306 VFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRD 370
            |||||||||.||:||.||||..|:.|||.||:||||||:||:|||.|.||||:||:||||||||:
Zfish   341 VFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQRE 405

  Fly   371 WYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAI 435
            ||||:|:||||::|.|||::||||.|:|||||||.||||||||||||||||||.|||.|||||.:
Zfish   406 WYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVV 470

  Fly   436 LDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK 500
            ||||||||:||||||||||||||:||||||||.||||.|||||||||||:|...|..||..||:|
Zfish   471 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSK 535

  Fly   501 FLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKI 565
            ||||||||||||||||||||||||||||||||:|||||||||||||||||||||.||::||||:|
Zfish   536 FLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERI 600

  Fly   566 VERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGE 630
            |||||:|||||.:|||.|||||...|:|.|||||:|||.||..||:|||::|||||||.||||||
Zfish   601 VERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDGILERGE 665

  Fly   631 AKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREKQKLNALGNWIEPPKRERKAN 695
            .||.|.|..:.:|||.|||.|||||.     :|||.|||||:|||:|:  :.|||||||||||||
Zfish   666 RKTMEMKEKMANLGEGSLRNFTMDTE-----NSVYNFEGEDYREKKKV--VTNWIEPPKRERKAN 723

  Fly   696 YAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTEL 760
            ||||||||||||||||||||||||||||.|||||||||||||||::||.|:|||:|||||:|.:|
Zfish   724 YAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDL 788

  Fly   761 GSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAK 825
            .:.| ::|:|||.||||||||.|||::|||||||||||.|||||||||||||||:|||||:|||:
Zfish   789 PNSA-EMQKEEQAKIDEAEPLNEEELEEKENLLSQGFTIWTKRDFNQFIKANEKWGRDDIENIAR 852

  Fly   826 DVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQL 890
            :|||||||||:||:|||||||.||||||:||.||||||.:||||:|||||||.|:.||:||||||
Zfish   853 EVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQL 917

  Fly   891 RLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRR 955
            |:.||.||||||||.|||||:|||||||||||:||:|||..||.|||||||||:|||||:|||||
Zfish   918 RISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRR 982

  Fly   956 CNTLITLIERENIELEEKERAEKKKKAPKGSVSAGSGSASSNTPAPAPQPKASQKRKSEVVATSS 1020
            ||||||||||||:||||:|:|||||:.|:.|                    ::||||.:......
Zfish   983 CNTLITLIERENMELEEREKAEKKKRGPRTS--------------------SAQKRKQDGTPDGR 1027

  Fly  1021 NSKKKKK 1027
            ..|||.|
Zfish  1028 GRKKKLK 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 DBINO <30..67 CDD:290603 15/48 (31%)
SNF2_N 131..411 CDD:278600 225/279 (81%)
DEXDc 148..287 CDD:238005 112/138 (81%)
HELICc 422..553 CDD:238034 112/130 (86%)
HAND 697..796 CDD:286232 78/98 (80%)
SANT 797..838 CDD:197842 34/40 (85%)
SANT 799..838 CDD:238096 32/38 (84%)
SLIDE 853..965 CDD:286233 90/111 (81%)
smarca5NP_001075098.2 PLN03142 4..1030 CDD:215601 750/1041 (72%)
DEXDc 183..322 CDD:238005 112/138 (81%)
Helicase_C 465..580 CDD:278689 98/114 (86%)
HAND 725..803 CDD:286232 61/78 (78%)
SANT 827..865 CDD:238096 32/37 (86%)
SLIDE 880..992 CDD:286233 90/111 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593655
Domainoid 1 1.000 472 1.000 Domainoid score I426
eggNOG 1 0.900 - - E2759_KOG0385
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1517 1.000 Inparanoid score I98
OMA 1 1.010 - - QHG54891
OrthoDB 1 1.010 - - D144251at33208
OrthoFinder 1 1.000 - - FOG0001113
OrthoInspector 1 1.000 - - otm26162
orthoMCL 1 0.900 - - OOG6_100877
Panther 1 1.100 - - O PTHR10799
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2588
SonicParanoid 1 1.000 - - X1240
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.