DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iswi and Smarcad1

DIOPT Version :10

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_031984.1 Gene:Smarcad1 / 13990 MGIID:95453 Length:1021 Species:Mus musculus


Alignment Length:676 Identity:225/676 - (33%)
Similarity:334/676 - (49%) Gaps:137/676 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EATEENSNETTSDAATS-----SSGEKEAE--FDNKIEADRSRRFDFLLKQTEIFTHFM--TNSA 65
            :|.|::..::.|||.:|     ||.|:..|  :..||                  .||:  ::.|
Mouse   348 KAVEDSEYDSGSDAGSSLDEDYSSCEEVMEDGYKGKI------------------LHFLQVSSIA 394

  Fly    66 KSPTKPKGRPKK---------------------------------IKDKDKEKDVADHRHRKTEQ 97
            :....||...||                                 .|...:|:||......|.|.
Mouse   395 ELTLIPKCSQKKAQKITELRPFNNWEALFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCED 459

  Fly    98 EEDEELLAEDSATKEIFRFDAS--------PAYI-KSGEMRDYQIRGLNWMISLYENGINGILAD 153
                   ..:..||::.....:        |:.: :|..::.||..||||:..::::|:||||||
Mouse   460 -------ISNKLTKQVTMLTGNGGGWNREQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILAD 517

  Fly   154 EMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTF 218
            |||||||:|.|:.|.||....|: |||:::||.||:.||:.|...|||||..:|..|.|:.|...
Mouse   518 EMGLGKTIQAIAFLAYLFQEGNK-GPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQI 581

  Fly   219 IRDVLMPGE-WDVCVTSYEMCIR---EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTAN 279
            ..::....| ::|.||:|...|.   ::|:|::....|.:.||.|.:||..|...:.|......|
Mouse   582 RFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARN 646

  Fly   280 RLLITGTPLQNNLHELWALLNFLLPDVFNSS-EDFDEWFNTNTCLGDDALITR----LHA--VLK 337
            |||:||||:||||.||.:||||::|.:|:|| .:....|::.|...|:..|..    .||  ::|
Mouse   647 RLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIK 711

  Fly   338 PFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLR 402
            ||:|||:|.||.|.|.|||:......:|:.|...|:.:..:....:|...|..:|  .|::||||
Mouse   712 PFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEM--CNVMMQLR 774

  Fly   403 KCTNHPYLF--------------------DGAEPGP--------------------------PYT 421
            |..|||.|.                    ...|..|                          .|.
Mouse   775 KMANHPLLHRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQ 839

  Fly   422 TDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDR 486
            .|..|:.:|||...|..:|.:|:::|.||::|||.|.||||||.......:.|.||||:|...:|
Mouse   840 LDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 904

  Fly   487 NRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 551
            ...|.|||.|... |:|:|||:||||||||.:|:|||::|.|.||..|.||.||.||:||.|:|.
Mouse   905 IHLIDEFNTDMDI-FVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVL 968

  Fly   552 VFRLITESTVEEKIVERAEVKLRLDK 577
            |.:||::.|:||.:::..:.||:|::
Mouse   969 VIKLISQGTIEESMLKINQQKLKLEQ 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 PLN03142 46..967 CDD:215601 213/633 (34%)
Smarcad1NP_031984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..151
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..246
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..366 6/17 (35%)
HepA <480..992 CDD:440319 197/515 (38%)
DEGH box 623..626 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000255 716..733 10/16 (63%)
DEAD box 1000..1003
Blue background indicates that the domain is not in the aligned region.

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