DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iswi and btaf1

DIOPT Version :9

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:XP_031762329.1 Gene:btaf1 / 100038214 XenbaseID:XB-GENE-488495 Length:1846 Species:Xenopus tropicalis


Alignment Length:670 Identity:210/670 - (31%)
Similarity:309/670 - (46%) Gaps:125/670 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TEIFT---HFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFR 115
            |:.|.   ..|...|..|..|....:.||.|.:|::..            |:||  |....|.:.
 Frog  1203 TQCFATLIRLMPLEAGIPDPPSMSEELIKLKARERNFL------------EQLL--DGKKLENYT 1253

  Fly   116 FDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLG------YLKHFK 174
            .   |..||: |:|.||..|:||:..|.:..::|||.|:||||||||:|.:|.      ..::.|
 Frog  1254 I---PVPIKA-ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRSKEYSK 1314

  Fly   175 NQAG-----PHIVIVPKSTLQNWVNEFKKWCPS--LRAVCLIGDQDTRNTFIRDVLMPGEWDVCV 232
            |::.     |.:|:.|.:...:||:|..|:|..  |..:...|....|......|   .:.::.|
 Frog  1315 NKSADCMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQV---KKHNMVV 1376

  Fly   233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWA 297
            .||::...:...|:...:.|.::||.|.|||.|:|||:.:::.....|::::|||:|||:.|||:
 Frog  1377 ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLSANYRIILSGTPIQNNVLELWS 1441

  Fly   298 LLNFLLPDVFNSSEDFDEWFNTNTCLGDDA------------LITRLHAVLKPFLLRRLKAEVEK 350
            |.:||:|....:...|...:........||            .:..||..:.||||||:|.:|.:
 Frog  1442 LFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVLQ 1506

  Fly   351 RLKPKKEMKIFVGLSKMQRDWY---TKVLLK-DID-VVNGAGKVEKMRLQNI---------LMQL 401
            .|.||.....:..||.:|...|   .|...| ||| .|:....:|:.....:         |..|
 Frog  1507 DLPPKIIQDYYCSLSPLQVQLYEDFAKSRAKTDIDETVSTTSLIEENEKPKVKATGHVFQALQYL 1571

  Fly   402 RKCTNHPYLFDGAEPGPPYTTDTHLVYN--SGKMAILDKLL------PKLQ-------------- 444
            ||..|||.|         ..|..|..|.  |.::.:.:..|      |||.              
 Frog  1572 RKLCNHPAL---------VLTTQHPEYKKISEQLGVQNSSLRDIQHAPKLSALKQLLLDCGLGNG 1627

  Fly   445 ---EQGS-------RVLIFSQMTRMLDILEDYC---HWRNYNYCRLDGQTPHEDRNRQIQEFNMD 496
               |.|:       |:|||.|:..||||:|...   |..:..|.||||..|...|:..:..||.|
 Frog  1628 GTAESGTEAVVAQHRILIFCQLKSMLDIVEQDLLKPHLPSVTYLRLDGTIPAGQRHSIVSRFNND 1692

  Fly   497 NSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTV 561
            .|...| :|:|..||||:||..||.|:..:.||||..||||||||||||||:.|.|:||||..|:
 Frog  1693 PSIDVL-LLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTL 1756

  Fly   562 EEKIVERAEVKLRLDKMVIQGGRLVDNRSNQ-LNKDEMLNIIRFGANQVFSSKETDITDEDIDVI 625
            ||||:...:.|:.:...||.    .:|.|.| :..|::|::.         :.:.|...|..|..
 Frog  1757 EEKIMGLQKFKMSIANTVIS----QENASLQSMGTDQLLDLF---------TLDKDGKSEKADAA 1808

  Fly   626 LERGEAKTAEQKAALDSLGE 645
            .|.|:   :..|:.||.|||
 Frog  1809 KESGK---SSMKSILDGLGE 1825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 DBINO <30..67 CDD:290603 4/15 (27%)
SNF2_N 131..411 CDD:278600 97/318 (31%)
DEXDc 148..287 CDD:238005 45/151 (30%)
HELICc 422..553 CDD:238034 63/165 (38%)
HAND 697..796 CDD:286232
SANT 797..838 CDD:197842
SANT 799..838 CDD:238096
SLIDE 853..965 CDD:286233
btaf1XP_031762329.1 HEAT repeat 285..320 CDD:293787
HEAT <335..>449 CDD:224331
HEAT repeat 347..372 CDD:293787
HEAT repeat 385..414 CDD:293787
HEAT repeat 425..461 CDD:293787
HEAT repeat 470..490 CDD:293787
HEAT repeat 501..536 CDD:293787
DUF3535 581..1047 CDD:403318
HEAT repeat 1049..1087 CDD:293787
HEAT repeat 1102..1132 CDD:293787
HEAT repeat 1144..1170 CDD:293787
HEAT repeat 1180..1209 CDD:293787 2/5 (40%)
HepA <1207..1797 CDD:223627 197/633 (31%)
DEXHc_Mot1 1262..1499 CDD:350757 73/239 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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