DRSC/TRiP Functional Genomics Resources

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Protein Alignment spt4 and supt4h1

DIOPT Version :10

Sequence 1:NP_610802.1 Gene:spt4 / 36387 FlyBaseID:FBgn0028683 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_001016679.1 Gene:supt4h1 / 549433 XenbaseID:XB-GENE-977391 Length:117 Species:Xenopus tropicalis


Alignment Length:112 Identity:68/112 - (60%)
Similarity:95/112 - (84%) Gaps:0/112 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFDAIPKDLRGLRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTT 65
            ||.:.:|||||.|||||:|||||:.||||.|||:||:.:|:||.|::.|||.||::||||:|:.:
 Frog     1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIVAMMS 65

  Fly    66 PTDSWVAKWQRLSRFTRGIYAISVSGTLPQSTLRDMKNRGIVYKSRD 112
            |.||||:||||::.|..|:||:||:|.|||..:|::|:||::|||||
 Frog    66 PDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVLYKSRD 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spt4NP_610802.1 Spt4 11..108 CDD:153422 57/96 (59%)
supt4h1NP_001016679.1 Spt4 11..108 CDD:153422 57/96 (59%)

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