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Protein Alignment spt4 and supt4h1
DIOPT Version :9
Sequence 1: | NP_610802.1 |
Gene: | spt4 / 36387 |
FlyBaseID: | FBgn0028683 |
Length: | 116 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016679.1 |
Gene: | supt4h1 / 549433 |
XenbaseID: | XB-GENE-977391 |
Length: | 117 |
Species: | Xenopus tropicalis |
Alignment Length: | 112 |
Identity: | 68/112 - (60%) |
Similarity: | 95/112 - (84%) |
Gaps: | 0/112 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAFDAIPKDLRGLRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTT 65
||.:.:|||||.|||||:|||||:.||||.|||:||:.:|:||.|::.|||.||::||||:|:.:
Frog 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIVAMMS 65
Fly 66 PTDSWVAKWQRLSRFTRGIYAISVSGTLPQSTLRDMKNRGIVYKSRD 112
|.||||:||||::.|..|:||:||:|.|||..:|::|:||::|||||
Frog 66 PDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVLYKSRD 112
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
spt4 | NP_610802.1 |
Spt4 |
11..108 |
CDD:153422 |
57/96 (59%) |
supt4h1 | NP_001016679.1 |
Spt4 |
11..108 |
CDD:153422 |
57/96 (59%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
117 |
1.000 |
Domainoid score |
I5855 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H68303 |
Inparanoid |
1 |
1.050 |
162 |
1.000 |
Inparanoid score |
I4115 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1617752at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003713 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105053 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X2573 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 7.060 |
|
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