DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17760 and Gnat1

DIOPT Version :9

Sequence 1:NP_001036539.1 Gene:CG17760 / 36385 FlyBaseID:FBgn0033756 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001102250.2 Gene:Gnat1 / 363143 RGDID:1304683 Length:350 Species:Rattus norvegicus


Alignment Length:349 Identity:146/349 - (41%)
Similarity:216/349 - (61%) Gaps:9/349 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ACEERRISREIDKFLKAEKKKARRELKLLVLGTGESGKTTFIKQMRIIHGKGFLDKERKQFTKNV 73
            |..|.:.|||::|.||.:.:|..|.:|||:||.|||||:|.:|||:|||..|:..:|..:|...:
  Rat     5 ASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAII 69

  Fly    74 FQNIFMAIQSMISAMDTLRIPYG----QQEHSKLADLVKSIDYKTVTRLEAPYLNAIKTLWKDAG 134
            :.|...:|.:::.||.||.|.||    |.:..||..:..:|:..|:.:   ...:.|:.||||:|
  Rat    70 YGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPK---EMSDIIQRLWKDSG 131

  Fly   135 IKECYNRRREYQLTDSTEYFLNDIARIERSDYQATDQDILHVRAPTTNIVEYPFNLDGFLIRLVD 199
            |:.|::|..||||.||..|:|:|:.|:....|..|:||:|..|..||.|:|..|:......|:.|
  Rat   132 IQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFD 196

  Fly   200 VAGQRTERRKWIHCFSNVTSIMFLVAMSEFDLSLAESENDNRMKESKALFHNIISFSWFQHSSVI 264
            |.|||:||:||||||..||.|:|:.|:|.:|:.|.|.:..|||.||..||::|.:..:|..:|::
  Rat   197 VGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIV 261

  Fly   265 LFLNKEDLFKKKILSTHLADYFPEYNGPKKDAKAAREFILYMFTSVN-PDPYKCIYPHFTVATNT 328
            |||||:|:|.:||...||:..||:|:||.....|. .:|...|..:| ....|.||.|.|.||:|
  Rat   262 LFLNKKDVFSEKIKKAHLSICFPDYDGPNTYDDAG-NYIKVQFLELNMRRDVKEIYSHMTCATDT 325

  Fly   329 ENIKFVFTAVKDTILELHLSETNL 352
            :|:||||.||.|.|::.:|.:..|
  Rat   326 QNVKFVFDAVTDIIIKENLKDCGL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17760NP_001036539.1 G_alpha 13..351 CDD:214595 143/342 (42%)
G-alpha 34..347 CDD:206639 134/317 (42%)
Gnat1NP_001102250.2 G-alpha 30..344 CDD:206639 134/317 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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