DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17760 and gpa1

DIOPT Version :10

Sequence 1:NP_001036539.1 Gene:CG17760 / 36385 FlyBaseID:FBgn0033756 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_595960.1 Gene:gpa1 / 2540414 PomBaseID:SPBC24C6.06 Length:407 Species:Schizosaccharomyces pombe


Alignment Length:344 Identity:120/344 - (34%)
Similarity:187/344 - (54%) Gaps:24/344 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKAEKKKARRELKLLVLGTGESGKTTFIKQMRIIHGKGFLDKERKQFTKNVFQNIFMAIQSMISA 87
            :|........::|:|:||.|:|||||.:||||:::..||....|||:...:|:||..::..::.|
pombe    64 VKGNSTSGGNDIKVLLLGAGDSGKTTIMKQMRLLYSPGFSQVVRKQYRVMIFENIISSLCLLLEA 128

  Fly    88 MDTLRIPYGQQEHSKLADLVKSIDYKTVTRLEAPY----LNAIKTLWKDAGIKECYNRRREYQLT 148
            ||...:....:.....|.:::    |..::...|:    ..|:..|..|..::...:......|.
pombe   129 MDNSNVSLLPENEKYRAVILR----KHTSQPNEPFSPEIYEAVHALTLDTKLRTVQSCGTNLSLL 189

  Fly   149 DSTEYFLNDIARIERSDYQATDQDILHVRAPTTNIVEYPFNLDGFLIRLVDVAGQRTERRKWIHC 213
            |:..|:.:.|.||....|..:||||||.|..||.|.|..|.|:....|..||.|||:||||||||
pombe   190 DNFYYYQDHIDRIFDPQYIPSDQDILHCRIKTTGISEETFLLNRHHYRFFDVGGQRSERRKWIHC 254

  Fly   214 FSNVTSIMFLVAMSEFDLSLAESENDNRMKESKALFHNIISFSWFQHSSVILFLNKEDLFKKKIL 278
            |.|||:::|||:::.:|..|.|..:.|:|:|:..|:.:|.:.|||..|::||||||.||||:|:.
pombe   255 FENVTALLFLVSLAGYDQCLVEDNSGNQMQEALLLWDSICNSSWFSESAMILFLNKLDLFKRKVH 319

  Fly   279 STHLADYFPEYNG------------PKKDAKAAREFILYM---FTSVNPDPYKCIYPHFTVATNT 328
            .:.:..:||:|..            |..| .|.|..:.|.   |.|:|....:..|.|||.||:|
pombe   320 ISPIQKHFPDYQEVGSTPTFVQTQCPLAD-NAVRSGMYYFYLKFESLNRIASRSCYCHFTTATDT 383

  Fly   329 ENIKFVFTAVKDTILELHL 347
            ..::.|..:|:|||:..:|
pombe   384 SLLQRVMVSVQDTIMSNNL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17760NP_001036539.1 G-alpha 34..347 CDD:206639 118/331 (36%)
gpa1NP_595960.1 G_alpha 68..406 CDD:214595 119/340 (35%)

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