DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17760 and gpa-10

DIOPT Version :9

Sequence 1:NP_001036539.1 Gene:CG17760 / 36385 FlyBaseID:FBgn0033756 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_504745.1 Gene:gpa-10 / 179075 WormBaseID:WBGene00001672 Length:356 Species:Caenorhabditis elegans


Alignment Length:369 Identity:113/369 - (30%)
Similarity:206/369 - (55%) Gaps:29/369 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCC----LSDQACEERRISREIDKFLKAEKKKARRELKLLVLGTGESGKTTFIKQMRIIHGKGF 61
            |..|    |:|:..::.::::||:|.|: :||..:.|..:|:||.|||||:|.:||||.:.|   
 Worm     1 MGVCQSFVLTDEMKDQIKVNKEIEKQLE-KKKNMQLEQTVLLLGPGESGKSTVMKQMRAMTG--- 61

  Fly    62 LDKERKQFTKN--------VFQNIFMAIQSMISAMDTLRIPYGQQEHSKLA----DLVKSIDYKT 114
                  .:||.        :.||:....:.::..:....:...:.:..:..    :|..::.:..
 Worm    62 ------NYTKTELHERKVLIIQNLCQFSEMLLEYVREYILEMTEDDDKRYTVMCEELKMAVIHDG 120

  Fly   115 VTRLEAPYLNAIKTLWKDAGIKECYNRRREYQLTDSTEYFLNDIARIERSDYQATDQDILHVRAP 179
            :.|.|  ..:.:|..|.::.|::.|::|..:.||||.:||.::|.||:...::.|:|||:|:|.|
 Worm   121 IMRPE--LADTLKEFWGNSAIQDAYSKRDTFHLTDSAKYFFDNIDRIKLPGFEPTNQDIVHIRVP 183

  Fly   180 TTNIVEYPFNLDGFLIRLVDVAGQRTERRKWIHCFSNVTSIMFLVAMSEFDLSLAESENDNRMKE 244
            ||.:.:....::...:.:.|..|||:|||||.|.|....:::|:.|:||||..|||.|..|||.|
 Worm   184 TTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQKLAEDEETNRMHE 248

  Fly   245 SKALFHNIISFSWFQHSSVILFLNKEDLFKKKILSTHLADYFPEYNGPKKDAKAAREFILYMFTS 309
            |..||..:.:..:|:.::|||||||.|||::|:....:.||||::.|....::..:.|.......
 Worm   249 SIRLFWTVFNGKFFKKAAVILFLNKIDLFEEKVKHVKIKDYFPKFEGANTVSEGTKFFRRQFREG 313

  Fly   310 VNPDPYKCIYPHFTVATNTENIKFVFTAVKDTILELHLSETNLL 353
            ::||..|.:|.|.|.|. ::.::.:...|.||:::.:|.:|.::
 Worm   314 IHPDFKKRMYTHETCAI-SDQVQIIINTVIDTVIQDNLKDTGMI 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17760NP_001036539.1 G_alpha 13..351 CDD:214595 108/349 (31%)
G-alpha 34..347 CDD:206639 100/324 (31%)
gpa-10NP_504745.1 G_alpha 17..354 CDD:214595 108/349 (31%)
G-alpha 39..350 CDD:206639 100/322 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162126
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.760

Return to query results.
Submit another query.