DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17760 and gpa-4

DIOPT Version :9

Sequence 1:NP_001036539.1 Gene:CG17760 / 36385 FlyBaseID:FBgn0033756 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:354 Identity:144/354 - (40%)
Similarity:205/354 - (57%) Gaps:13/354 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CLSDQACEERRISREIDKFLKAEKKKARRELKLLVLGTGESGKTTFIKQMRIIHGKGFLDKERKQ 68
            |......|.::.|:.||:.|:.:.::...|:|||:||.|||||:|.::||||:|..||..:|:..
 Worm     3 CFHSTGSEAKKRSKLIDEQLRHDHERCVGEIKLLLLGAGESGKSTIVRQMRILHETGFNKQEQMA 67

  Fly    69 FTKNVFQNIFMAIQSMISAMDTLRIPYGQQEHSKLADL-------VKSIDYKTVTRLEAPYLNAI 126
            :...||.|:..::.:::.||..|.|.:......:.|.:       |.:.:......||...|  :
 Worm    68 YRPVVFSNMVQSMLAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAELSEAFSLELSDL--M 130

  Fly   127 KTLWKDAGIKECYNRRREYQLTDSTEYFLNDIARIERSDYQATDQDILHVRAPTTNIVEYPFNLD 191
            |.||.|.|:|:|..|..||||.||.||:.|.:.||..|.|..|..|||..|..:|.|||..|...
 Worm   131 KQLWMDEGVKKCVKRAHEYQLNDSAEYYFNALDRISSSSYLPTQDDILRARVKSTGIVETTFMYK 195

  Fly   192 GFLIRLVDVAGQRTERRKWIHCFSNVTSIMFLVAMSEFDLSLAESENDNRMKESKALFHNIISFS 256
            ....::.||.|||:||:||||||.:||:::|.||:||:||.|||.:..|||.||..||.:|::..
 Worm   196 DLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAEDQTMNRMHESMQLFDSIVNNC 260

  Fly   257 WFQHSSVILFLNKEDLFKKKILSTHLADYFPEYNGPKKDAKAAREFILYMFTSVN---PDPYKCI 318
            ||..:|:||||||.|:|:::|..|.|...||||.|.....:.: .||...|..:|   ....|.|
 Worm   261 WFTETSIILFLNKMDIFEERIRYTPLTVCFPEYQGGMTITETS-TFIQSRFEILNKRQTPAQKEI 324

  Fly   319 YPHFTVATNTENIKFVFTAVKDTILELHL 347
            |.|||.||:|.||:|||.||.|.|:..:|
 Worm   325 YSHFTCATDTNNIRFVFDAVTDIIIRNNL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17760NP_001036539.1 G_alpha 13..351 CDD:214595 142/345 (41%)
G-alpha 34..347 CDD:206639 136/322 (42%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 142/345 (41%)
G-alpha 33..353 CDD:206639 136/322 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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