DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17760 and gpa-16

DIOPT Version :9

Sequence 1:NP_001036539.1 Gene:CG17760 / 36385 FlyBaseID:FBgn0033756 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_490790.1 Gene:gpa-16 / 171675 WormBaseID:WBGene00001678 Length:357 Species:Caenorhabditis elegans


Alignment Length:359 Identity:149/359 - (41%)
Similarity:218/359 - (60%) Gaps:10/359 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCCLSDQACEERRISREIDKFLKAEKKKARRELKLLVLGTGESGKTTFIKQMRIIHGKGFLDKE 65
            |.|.:|.:....:|.|::||:.||.:.:.:.|.:|||:||.|||||:|.:|||||||..|:..:|
 Worm     1 MGCIMSQEDEAAKRRSKKIDRLLKEDGENSMRTIKLLLLGAGESGKSTILKQMRIIHDVGYTTEE 65

  Fly    66 RKQFTKNVFQNIFMAIQSMISAMDTLRIPYGQQEHSKLADLVKSIDYKTV---TRLEAPYLNAIK 127
            ||.|...|:.||.:::.::|.||:.|:|.:...:|.  :|..|.:.:.|.   ..|....:..:|
 Worm    66 RKVFRGVVYGNIILSLNAIIHAMEQLKISFTTLDHE--SDARKLLMFSTTGEEDELPEELVVLMK 128

  Fly   128 TLWKDAGIKECYNRRREYQLTDSTEYFLNDIARIERSDYQATDQDILHVRAPTTNIVEYPFNLDG 192
            ::|.|:||::...|.|||||.||..|:|:.:.||...:|..|..|||..|..||.|||..|....
 Worm   129 SVWSDSGIQKALERSREYQLNDSAGYYLSQLDRICAPNYIPTQDDILRTRIKTTGIVETQFVYKD 193

  Fly   193 FLIRLVDVAGQRTERRKWIHCFSNVTSIMFLVAMSEFDLSLAESENDNRMKESKALFHNIISFSW 257
            .|..:.||.|||:||:||||||.:||:::|.||:||:|:.|.|....|||:||..||.:|.:..|
 Worm   194 RLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMVLVEDCQTNRMRESLKLFDSICNNKW 258

  Fly   258 FQHSSVILFLNKEDLFKKKILSTHLADYFPEYNGPKKDAKAAREFILYMFTSVNP----DPYKCI 318
            |..:|:||||||:|||::||:.:.|...||||.| ..:.:.|..:|...|..:|.    :..:.|
 Worm   259 FVETSIILFLNKKDLFEEKIVRSPLTHCFPEYTG-ANNYEEASAYIQQQFEDMNKRTTGEKNQEI 322

  Fly   319 YPHFTVATNTENIKFVFTAVKDTILELHLSETNL 352
            |..||.||:|.||:|||.||.|.|:..:|....|
 Worm   323 YTQFTCATDTNNIRFVFDAVTDIIIRDNLRTCGL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17760NP_001036539.1 G_alpha 13..351 CDD:214595 145/344 (42%)
G-alpha 34..347 CDD:206639 137/319 (43%)
gpa-16NP_490790.1 G_alpha 13..355 CDD:214595 145/344 (42%)
G-alpha 34..351 CDD:206639 137/319 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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