DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphaq and Gna12

DIOPT Version :10

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_112296.1 Gene:Gna12 / 81663 RGDID:71018 Length:379 Species:Rattus norvegicus


Alignment Length:412 Identity:153/412 - (37%)
Similarity:224/412 - (54%) Gaps:63/412 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CCLSEEA--------------KEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQM 53
            |.|..||              :|.:|.:::|:..|.|::|..||.:|:||||.||||||||:|||
  Rat    11 CLLPAEAGARERRAGAARDAEREARRRSRDIDALLARERRAVRRLVKILLLGAGESGKSTFLKQM 75

  Fly    54 RIIHGSGYSDEDKRGYIKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYET---- 114
            |||||..:..:....:...:|.||....:.::.|.|.|.|.:...|:.:....:|:.:.:.    
  Rat    76 RIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARDKLGIPWQHSENEKHGMFLMAFENKAGLPV 140

  Fly   115 -VTTFEDPYLNAIKTLWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRV 178
             ..||: .|:.|:..||.|:||:|.:.||.|:||.:|.||:|.:|||:.                
  Rat   141 EPATFQ-LYVPALSALWRDSGIREAFSRRSEFQLGESVKYFLDNLDRIG---------------- 188

  Fly   179 PTTGIIEYPFDLEEIRFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDV 243
                                       |.:|.|::||||.||..|.||:|:.|.:..|.|:||||
  Rat   189 ---------------------------QLNYFPSKQDILLARKATKGIVEHDFVIKKIPFKMVDV 226

  Fly   244 GGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVIL 308
            |||||:|:||..||:.:|||:|:|:.|||||:|.|....||:.||..:|.||:....|.|.|:||
  Rat   227 GGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFETIVNNKLFFNVSIIL 291

  Fly   309 FLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAITAREFILRMFVDLNPDSEKIIYSHFTCATDTEN 373
            ||||.|||.||:....:..:||::.|........:.::::.|.....:..|.::.|||.|.||||
  Rat   292 FLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRKRRNRGKPLFHHFTTAIDTEN 356

  Fly   374 IKLVFCAVKDTIMQNALKEFNL 395
            |:.||.||||||:|..||:..|
  Rat   357 IRFVFHAVKDTILQENLKDIML 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 138/360 (38%)
Gna12NP_112296.1 G_alpha 40..377 CDD:214595 146/380 (38%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 57..70 10/12 (83%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 198..206 5/7 (71%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 221..230 7/8 (88%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 290..297 6/6 (100%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 349..354 2/4 (50%)

Return to query results.
Submit another query.