DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphaq and Gnat1

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001102250.2 Gene:Gnat1 / 363143 RGDID:1304683 Length:350 Species:Rattus norvegicus


Alignment Length:391 Identity:171/391 - (43%)
Similarity:230/391 - (58%) Gaps:50/391 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGYIKLV 73
            |..:::.::|:||:|:.|.....|.:||||||.|||||||.:|||:|||..|||.|:...:|.::
  Rat     5 ASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAII 69

  Fly    74 FQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVT--TFEDPYLNAIKTLWDDAGIQ 136
            :.|...::.::::||..|.|.||.....:.|..:|.: .:|:.  |......:.|:.||.|:|||
  Rat    70 YGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHM-ADTIEEGTMPKEMSDIIQRLWKDSGIQ 133

  Fly   137 ECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEIRFSYLSDL 201
            .|:||..||||.|||.|||.||:|:..|.|:|||||:||.||.||||||..|..:::.       
  Rat   134 ACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLN------- 191

  Fly   202 ARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFENVTSIIFL 266
                                                |||.|||||||||:|||||||.||.|||:
  Rat   192 ------------------------------------FRMFDVGGQRSERKKWIHCFEGVTCIIFI 220

  Fly   267 VALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPE 331
            .|||.||.:|.|.|..|||.||..||.:|..:.:|..:|::|||||||:..|||..:||...||:
  Rat   221 AALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSICFPD 285

  Fly   332 YDGPQR-DAITAREFILRMFVDLNPDSE-KIIYSHFTCATDTENIKLVFCAVKDTIMQNALKEFN 394
            ||||.. |  .|..:|...|::||...: |.||||.||||||:|:|.||.||.|.|::..||:..
  Rat   286 YDGPNTYD--DAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCG 348

  Fly   395 L 395
            |
  Rat   349 L 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 161/359 (45%)
Gnat1NP_001102250.2 G-alpha 30..344 CDD:206639 161/359 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.