DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and Gnat3

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_775162.1 Gene:Gnat3 / 286924 RGDID:727817 Length:354 Species:Rattus norvegicus


Alignment Length:400 Identity:180/400 - (45%)
Similarity:232/400 - (57%) Gaps:60/400 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSEEAKEQKRINQEIEKQLRRD-KRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRG 68
            :|.|:||..:.::|:||:|:.| :||| |.:||||||.|||||||.:|||:|||.:|||.::...
  Rat     5 ISSESKESAKRSKELEKKLQEDAERDA-RTVKLLLLGAGESGKSTIVKQMKIIHKNGYSKQECME 68

  Fly    69 YIKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVTTFED----PYL-NAIKT 128
            :..:|:.|...::.:::|||..|.|.|......|...|::|:    ..|.||    |.| ..||.
  Rat    69 FKAVVYSNTLQSILAIVKAMTTLGIDYVNPRSREDQQLLLSM----ANTLEDGDMTPQLAEIIKR 129

  Fly   129 LWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEI 193
            ||.|.|||.|::|..||||.|||.|||.||||:..|.|:|.|||:|..||.||||||..|..:::
  Rat   130 LWGDPGIQACFERASEYQLNDSAAYYLNDLDRLTAPGYVPNEQDVLHSRVKTTGIIETQFSFKDL 194

  Fly   194 RFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFE 258
            .                                           |||.|||||||||:|||||||
  Rat   195 N-------------------------------------------FRMFDVGGQRSERKKWIHCFE 216

  Fly   259 NVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYS 323
            .||.|||..|||.||.:|.|.:..|||.||..||.:|..:.:|..:|::||||||||.:||:...
  Rat   217 GVTCIIFCAALSAYDMVLVEDEEVNRMHESLHLFNSICNHKYFATTSIVLFLNKKDLFQEKVTKV 281

  Fly   324 HLVDYFPEYDGPQ--RDAITAREFILRMFVDLNPDSE-KIIYSHFTCATDTENIKLVFCAVKDTI 385
            ||...||||.||.  .|   |..:|...|:|||...| |.||||.||||||:|:|.||.||.|.|
  Rat   282 HLSICFPEYTGPNTFED---AGNYIKNQFLDLNLKKEDKEIYSHMTCATDTQNVKFVFDAVTDII 343

  Fly   386 MQNALKEFNL 395
            ::..||:..|
  Rat   344 IKENLKDCGL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 164/363 (45%)
Gnat3NP_775162.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 8/21 (38%)
G-alpha 34..348 CDD:206639 164/363 (45%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 35..48 11/12 (92%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 173..181 4/7 (57%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 196..205 7/8 (88%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 265..272 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 324..329 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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