DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and gpa-6

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_510189.1 Gene:gpa-6 / 181442 WormBaseID:WBGene00001668 Length:364 Species:Caenorhabditis elegans


Alignment Length:401 Identity:138/401 - (34%)
Similarity:205/401 - (51%) Gaps:74/401 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGY 69
            ||.|.:.....::.|::.|.:|..|.....|:|||||.||||||..||||::|..||:.||...|
 Worm    13 LSPEERANSSKSRAIDRALSKDHTDDLNRFKILLLGTAESGKSTIFKQMRVLHLDGYAKEDALEY 77

  Fly    70 IKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVTTFED-------------P 121
            :.::..|...|:..::.|.....|::         |:.:.   |.|..|||             |
 Worm    78 LSIIHSNCMEALTQLVDACTAFGINH---------DITVQ---EDVNRFEDFKRKLRDPEGLVIP 130

  Fly   122 YL--NAIKTLWDDAGIQECYDRRR-EYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGI 183
            .:  ..:..:|....:|.|||.|| .:.|.|||||                              
 Worm   131 VVIGRCMDRVWHSPSLQLCYDTRRFRFALLDSAKY------------------------------ 165

  Fly   184 IEYPFDLEEIRFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRS 248
                         ::.::.|:.:.:|:|:.|||:..|:.||||.|..|:...:.|:|||||||||
 Worm   166 -------------FMDNIVRLTEDNYVPSIQDIVHCRISTTGINELAFNYKKMDFKMVDVGGQRS 217

  Fly   249 ERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK 313
            |||||||||:||..|:|:|::|:|||:..|.:..|||::|..:|:||:....|:::|::|||||.
 Worm   218 ERRKWIHCFDNVDMILFIVSMSDYDQLDPEDNKYNRMKQSYEIFKTIVHSDLFRHASIVLFLNKY 282

  Fly   314 DLLEEKIMYSHLVDYFPEYDGPQRDAITAREFILRMFVDLNPDSEKIIYSHFTCATDTENIKLVF 378
            |:..||:..|.|...|..|:|...:. :|||||.::|.....|..| .:...|.||||.||.|||
 Worm   283 DVFVEKLKTSPLRRSFKNYEGDNSEE-SAREFIKKLFRRCITDRHK-FFVFETTATDTGNIDLVF 345

  Fly   379 -CAVKDTIMQN 388
             .||...:.:|
 Worm   346 GSAVAHIVNEN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 131/372 (35%)
gpa-6NP_510189.1 G_alpha 22..361 CDD:214595 135/392 (34%)
G-alpha 43..357 CDD:206639 131/371 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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