DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and odr-3

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_506290.1 Gene:odr-3 / 179806 WormBaseID:WBGene00003850 Length:356 Species:Caenorhabditis elegans


Alignment Length:399 Identity:166/399 - (41%)
Similarity:234/399 - (58%) Gaps:54/399 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MECCLSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDED 65
            |..|.|.|..|....|:||||||..|||.....:||||||.||.||||.:|||:|:|.:|:::|:
 Worm     1 MGSCQSNENSEGNARNKEIEKQLNADKRAGSSIVKLLLLGAGECGKSTVLKQMQILHSNGFTEEE 65

  Fly    66 KRGYIKLVFQNIFMAMQSMIKAMD---MLKISYGQGEHSELADLVMSIDYETVTTFEDPYLNAIK 127
            ......:|:.|...||.::::|||   .|.:..||.|..:...:.:..:.|......:....||:
 Worm    66 VNEKRAIVYNNTVSAMCTILRAMDGVLHLPLENGQKEAEKAIVMKVQENGEEGEALTEEVSKAIQ 130

  Fly   128 TLWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEE 192
            :||.|.|:::.::.|.||||.|||||:|.:..|:::|.|.|.:||||..||.|||::|..|.::|
 Worm   131 SLWADPGVKKAFEMRSEYQLPDSAKYFLDNCQRISEPGYRPNDQDILYSRVATTGVVEVKFKIKE 195

  Fly   193 IRFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCF 257
                                                    ||   ||:.||||||||||||||||
 Worm   196 ----------------------------------------LD---FRVFDVGGQRSERRKWIHCF 217

  Fly   258 ENVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMY 322
            :||.||||:.|:|||||:|||.:..|||.||..||.:|....||.::::|||:|||||..|||..
 Worm   218 DNVESIIFITAISEYDQVLFEDETTNRMIESMQLFNSICNSTWFLSTAMILFMNKKDLFMEKIQR 282

  Fly   323 SHLVDYFPEYDGPQ--RDAITAREFILRMF--VDLNPDSEKIIYSHFTCATDTENIKLVFCAVKD 383
            .::...||:|:|.|  .:|::   ||.:.|  ::|||| :|.||.|.||||||..::||..:|.|
 Worm   283 VNITTAFPDYEGGQNYEEAVS---FIKQKFAELNLNPD-KKTIYMHETCATDTNQVQLVISSVID 343

  Fly   384 TIMQNALKE 392
            ||:|..|::
 Worm   344 TIIQKNLQK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 150/362 (41%)
odr-3NP_506290.1 G_alpha 14..354 CDD:214595 161/386 (42%)
G-alpha 34..350 CDD:206639 150/362 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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