DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and gpa-13

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001256451.1 Gene:gpa-13 / 179746 WormBaseID:WBGene00001675 Length:402 Species:Caenorhabditis elegans


Alignment Length:382 Identity:103/382 - (26%)
Similarity:188/382 - (49%) Gaps:60/382 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDED---KRGY 69
            |.:..:.|....:|     ..|....::|||||:.||||:|.::|:|:::...:::.:   :|.:
 Worm    69 EIRASRSITPASQK-----SEDPYSHIRLLLLGSAESGKTTVLEQVRLLYKQHFTESEYFHRRAF 128

  Fly    70 IKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVTTFEDPYLNAIKTLWDDAG 134
            |   :.|||.:::::.:||.|..|.:....:...|..:::.::.....|.......||.:|:|..
 Worm   129 I---YHNIFKSIKALCRAMRMSDIQFADPINMGRAQSIIADEHGHYGLFSKDLAEKIKHIWNDKS 190

  Fly   135 IQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEIRFSYLS 199
            :|:.|.||.::.|.|||.|:|.::|                                        
 Worm   191 MQKLYARRSQFNLNDSASYFLNNID---------------------------------------- 215

  Fly   200 DLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFENVTSII 264
               :|...||.|:|:|::.|.|||.|:....|......|::.|:|||:.:||||...:|.:.:|.
 Worm   216 ---KINMVDYKPSERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIF 277

  Fly   265 FLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYF 329
            |.:|:|||||::.|....||::::..|.::|...|.|..:.:.||||:.|:..||:....|..|.
 Worm   278 FCIAISEYDQVMSEDMVTNRLDDALNLLQSISEDPAFATTPIYLFLNEIDVFCEKLSVIPLSKYK 342

  Fly   330 PEY-DGPQRDAITAREFILRMFVDLNPDSEKIIYSHFTC-ATDTENI-KLVFCAVKD 383
            |:: .|.|.|||   :|:..:..:.....::.:|..:.| |.||:.: :|:....||
 Worm   343 PDFKGGDQDDAI---DFMENLACEALGKRDRSLYRVYRCIAIDTQMMAELLSTVFKD 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 99/356 (28%)
gpa-13NP_001256451.1 MRP-S32 <13..>54 CDD:287214
G_alpha 70..397 CDD:214595 102/381 (27%)
G-alpha 90..401 CDD:206639 99/356 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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