DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and gpa-3

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001309498.1 Gene:gpa-3 / 179319 WormBaseID:WBGene00001665 Length:353 Species:Caenorhabditis elegans


Alignment Length:393 Identity:153/393 - (38%)
Similarity:221/393 - (56%) Gaps:46/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MECCLSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDED 65
            |..|.|.|.||....::.|:|::.::....::.:||||||.||.||||.:|||||:|..|::.|:
 Worm     1 MGLCQSAEDKELTLKSKAIDKEMMQNHMSQQKVVKLLLLGAGECGKSTVLKQMRILHDHGFTAEE 65

  Fly    66 KRGYIKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSID--YETVTTFEDPYLNAIKT 128
            ......:||.|...||.:::|.|:.|::::.:......|..||...  .:....|.:...|||:.
 Worm    66 AEQQKSVVFNNTLQAMTAILKGMEALRMTFDKPIRENDAKFVMESHKMLQEAKVFPEELANAIQA 130

  Fly   129 LWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEI 193
            ||:|..:|:...:..|:|:.:||.::|..|||:..|                             
 Worm   131 LWNDKAVQQVIAKGNEFQMPESAPHFLSSLDRIKLP----------------------------- 166

  Fly   194 RFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFE 258
                          ||.|||||||.:|:.||||:|..|.:..:.||:.|||||||||:|||||||
 Worm   167 --------------DYNPTEQDILLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFE 217

  Fly   259 NVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYS 323
            :|.:|||:.|:|||||:|||.:..|||.||..||.:|....||.|:|:|||||||||..|||..:
 Worm   218 DVNAIIFIAAISEYDQVLFEDETTNRMIESMRLFESICNSRWFINTSMILFLNKKDLFAEKIKRT 282

  Fly   324 HLVDYFPEYDGPQRDAITAREFILRMFVDLNPDSEKIIYSHFTCATDTENIKLVFCAVKDTIMQN 388
            .:...||:|.|.|....:.| :|...|..||.:.||.||.|.||||||:.::::..:|.|.|:|.
 Worm   283 SIKSAFPDYKGAQTYDESCR-YIEEKFDGLNANPEKTIYMHQTCATDTDQVQMILDSVIDMIIQA 346

  Fly   389 ALK 391
            .|:
 Worm   347 NLQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 144/357 (40%)
gpa-3NP_001309498.1 G-alpha 34..348 CDD:206639 144/357 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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