DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaq and gpa-4

DIOPT Version :9

Sequence 1:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:398 Identity:165/398 - (41%)
Similarity:224/398 - (56%) Gaps:58/398 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CLSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRG 68
            |......|.|:.::.|::|||.|......|:||||||.|||||||.::||||:|.:|::.:::..
 Worm     3 CFHSTGSEAKKRSKLIDEQLRHDHERCVGEIKLLLLGAGESGKSTIVRQMRILHETGFNKQEQMA 67

  Fly    69 YIKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMS-----IDYETVTTFEDPYLNAIKT 128
            |..:||.|:..:|.:::|||..|.||:......|.|.:.:|     .:.|....|.....:.:|.
 Worm    68 YRPVVFSNMVQSMLAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAELSEAFSLELSDLMKQ 132

  Fly   129 LWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEI 193
            ||.|.|:::|..|..||||.|||:||...|||::..:||||:.||||.||.:|||:|..|..:: 
 Worm   133 LWMDEGVKKCVKRAHEYQLNDSAEYYFNALDRISSSSYLPTQDDILRARVKSTGIVETTFMYKD- 196

  Fly   194 RFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFE 258
                                                      :.|:|.|||||||||:||||||:
 Worm   197 ------------------------------------------LCFKMFDVGGQRSERKKWIHCFD 219

  Fly   259 NVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYS 323
            :||::||.|||||||..|.|....|||.||..||.:|:...||..:|:||||||.|:.||:|.|:
 Worm   220 SVTAVIFCVALSEYDLRLAEDQTMNRMHESMQLFDSIVNNCWFTETSIILFLNKMDIFEERIRYT 284

  Fly   324 HLVDYFPEYDGPQRDAITARE---FILRMFVDLN---PDSEKIIYSHFTCATDTENIKLVFCAVK 382
            .|...||||.|    .:|..|   ||...|..||   ..::|.|||||||||||.||:.||.||.
 Worm   285 PLTVCFPEYQG----GMTITETSTFIQSRFEILNKRQTPAQKEIYSHFTCATDTNNIRFVFDAVT 345

  Fly   383 DTIMQNAL 390
            |.|::|.|
 Worm   346 DIIIRNNL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 155/366 (42%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 163/389 (42%)
G-alpha 33..353 CDD:206639 155/366 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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