DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amph and PIN3

DIOPT Version :9

Sequence 1:NP_523717.1 Gene:Amph / 36383 FlyBaseID:FBgn0027356 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_015480.1 Gene:PIN3 / 856277 SGDID:S000006358 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:132 Identity:32/132 - (24%)
Similarity:58/132 - (43%) Gaps:29/132 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 NIVTISDTNTDTDTKTSTGTSQKGRPVPVVNRHSVNNLNKNPFEDDDERIYEVPADANTADLP-- 536
            :::..|.||..|:.....|::       |::....:.:||:           :||..:.|:.|  
Yeast     4 SLINRSLTNIRTELDFLKGSN-------VISNDVYDQINKS-----------LPAKWDPANAPRN 50

  Fly   537 --PGVLYRVKATYGYAKEDVDELSFEIGDLIRVIEYDDPEDQEEGWLMGQKEGTNEKGLFPANFT 599
              |..|..|:|.|.:..:...:|..:.||.::::|...||     |..|...|  ..|:||||:.
Yeast    51 ASPASLEYVEALYQFDPQQDGDLGLKPGDKVQLLEKLSPE-----WYKGSCNG--RTGIFPANYV 108

  Fly   600 RP 601
            :|
Yeast   109 KP 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmphNP_523717.1 BAR_Amphiphysin 26..238 CDD:153272
SH3_Amphiphysin 539..602 CDD:212724 19/63 (30%)
PIN3NP_015480.1 SH3 58..110 CDD:418401 17/58 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343053
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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