Protein Alignment Amph and LSB1

DIOPT Version :9

• Sequence 1: NP_523717.1
• Gene: Amph / 36383
• FlyBaseID: FBgn0027356
• Length: 602
• Species: Drosophila melanogaster
• Sequence 2: NP_011652.1
• Gene: LSB1 / 853037
• SGDID: S000003368
• Length: 241
• Species: Saccharomyces cerevisiae
• Alignment Length: 119
• Identity: 31/119 - (26%)
• Similarity: 52/119 - (43%)
• Gaps: 33/119 - (27%)

  Fly   502 VVNRHSVNNLNKNPFEDDDE----RIYEV---------------PADANTADLPPGVLYRVKATY 547
            :|||...|..|:..|..:..    .|:|:               |.:|:|.:.       |:|.|
Yeast     5 LVNRSLKNIRNELEFLKESNVISGDIFELINSKLPEKWDGNQRSPQNADTEEY-------VEALY 62

  Fly   548 GYAKEDVDELSFEIGDLIRVIEYDDPEDQEEGWLMGQKEGTNEKGLFPANFTRP 601
            .:..:...:||.:.||.|:|:|...|:     |..|  :..|:.|:||||:.:|
Yeast    63 DFEAQQDGDLSLKTGDKIQVLEKISPD-----WYRG--KSNNKIGIFPANYVKP 109

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Amph	NP_523717.1	BAR_Amphiphysin	26..238	CDD:153272
		SH3_Amphiphysin	539..602	CDD:212724	20/63 (32%)
LSB1	NP_011652.1	SH3	55..108	CDD:214620	19/66 (29%)
		PRK14971	<100..>156	CDD:237874	6/10 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343051
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930