DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amph and RVS167

DIOPT Version :9

Sequence 1:NP_523717.1 Gene:Amph / 36383 FlyBaseID:FBgn0027356 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_010676.1 Gene:RVS167 / 851996 SGDID:S000002796 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:630 Identity:121/630 - (19%)
Similarity:204/630 - (32%) Gaps:189/630 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MLAKSVQKHAGRAKEKILQNLGKVDRTADEIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQA 72
            |..|...|...||.:...|.....::|.|.:::|....|...:....:|.:|...|...|.....
Yeast     1 MSFKGFTKAVSRAPQSFRQKFKMGEQTEDPVYEDAERRFQELEQETKKLSEESKRYSTAVNGMLT 65

  Fly    73 ASKTLMDSVCEIYEPQWSG----------------------YDALQAQTGASESLWADFAHKLGD 115
            .......|:.||::| .||                      |.|:.|:  ..|:|..|.| .:.:
Yeast    66 HQIGFAKSMEEIFKP-ISGKMSDPNATIPEDNPQGIEASEQYRAIVAE--LQETLKPDLA-LVEE 126

  Fly   116 QVLIPLNTYTGQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANAN-KRKDDVKLTKGREQLEEAR 179
            :::.|..........::|...|||.|.:|.|...:::...:.... ..||:.:|.|.:.|:|.|:
Yeast   127 KIVTPCQELLKIITYIRKMATKRNHKKLDLDRHLNTYNKHEKKKEPTAKDEERLYKAQAQVEVAQ 191

  Fly   180 RTYEILNTELHDELPALYDSRILFLVTNLQTLFATE-QVFHNETAKIYSELEAIVDKLATESQRG 243
            :.|:..|..|..:||.|:.....|:.....:.:..: .:|:.    :|:.|:             
Yeast   192 QEYDYYNDLLKTQLPILFSLEAEFVKPLFVSFYFMQLNIFYT----LYNRLQ------------- 239

  Fly   244 SNTLRKQTSNPIKTSSPVQSPVNKLNNANINSNYQNQITTNGGSSLANSPTSTSSSLQEPRFDSV 308
                            .::.|...||                 |.:..|..:...:::| :.|::
Yeast   240 ----------------DMKIPYFDLN-----------------SDIVESYIAKKGNVEE-QTDAL 270

  Fly   309 SSTP----------EPRPESPAAALVSATPSSPVENGVTTKSLERPELSGLNASAKATTTTQTSP 363
            :.|.          |........|....:|.|...:||           |..|.....|.|..:|
Yeast   271 TITHFKLGYSKAKLEMTRRKYGVATAEGSPVSGASSGV-----------GYGAGYDPATATSPTP 324

  Fly   364 T---EDKAVVSEAVKPSETEGAAVAASVTPAPPATPAQINGNNNEPSIVKEGGKQPKELPSTTSN 425
            |   ...|..|.|.:|:...|.|.|.. |.|...|.|               |.....:|.|...
Yeast   325 TGYGYGAAAPSYAAQPAAQYGTAAAVG-TAAAVGTAA---------------GAAAGAVPGTYPQ 373

  Fly   426 AEAAAEAAANNGNSIEEHKQKKLGNDTTVTATETVTVTQHSVTSTDTDNIVTISDTNTDTDTKTS 490
             .|||::....|...::..|::.|                                         
Yeast   374 -YAAAQSPPLTGLGFQQSPQQQQG----------------------------------------- 396

  Fly   491 TGTSQKGRPVPVVNRHSVNNLNKNPFEDDDERIYEVPADANTADLPPGVLYRVKATYGYAKEDVD 555
                    |.|..:         ||....   :...||.|..|  .||| ..|.|.|.|..:...
Yeast   397 --------PPPAYS---------NPLTSP---VAGTPAAAVAA--APGV-ETVTALYDYQAQAAG 438

  Fly   556 ELSFEIGDLIRVIEYDDPEDQEEGWLMGQKEGTNEKGLFPANFTR 600
            :|||..|.:|.::: ..|:..|  |..|:..|  ::|:||.|:.:
Yeast   439 DLSFPAGAVIEIVQ-RTPDVNE--WWTGRYNG--QQGVFPGNYVQ 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmphNP_523717.1 BAR_Amphiphysin 26..238 CDD:153272 47/235 (20%)
SH3_Amphiphysin 539..602 CDD:212724 19/62 (31%)
RVS167NP_010676.1 BAR_Rvs167p 29..245 CDD:153283 45/252 (18%)
SH3 425..478 CDD:418401 18/57 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343049
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3771
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46473
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R565
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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