DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amph and bin2a

DIOPT Version :9

Sequence 1:NP_523717.1 Gene:Amph / 36383 FlyBaseID:FBgn0027356 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_009295251.1 Gene:bin2a / 492780 ZFINID:ZDB-GENE-041114-126 Length:492 Species:Danio rerio


Alignment Length:479 Identity:145/479 - (30%)
Similarity:221/479 - (46%) Gaps:78/479 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTENKGI--------MLAKSVQKHAGRAKEKILQNLGKVDRTADEIFDDHLNNFNRQQASANRLQ 57
            |.|:|..        :|||.|||...||:||:||.|||.:.|.||.|:..:.|.:.||:...|:.
Zfish    30 MAESKASISSKGGANVLAKRVQKQFNRAQEKVLQRLGKSEETKDEHFEQCVMNLHMQQSDGYRIY 94

  Fly    58 KEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGYDALQAQTGASESLWADFAHKLGDQVLIPLN 122
            |:...|:..|...:.||..|..|:.:.|:.:|.|...|.......:.||.|:..||.||.||.:.
Zfish    95 KDLKAYLNAVTVMRDASSRLFQSLFDAYDDRWDGGQDLGEVVEGEDLLWKDYESKLHDQALITME 159

  Fly   123 TYTGQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNT 187
            :|..|||:::.:|.||||||:|||..||....|| ||.|| ||:|:.|..:::..|:..:|.:|.
Zfish   160 SYMSQFPDVRDRVAKRNRKLVDYDSARHQLTGLQ-NAKKR-DDIKIGKAEDEMNAAKVIFEDINR 222

  Fly   188 ELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLATESQRGSNTLRK-QT 251
            ||..|||.|:||||...||..|.:.:..:.|:.|..|....|:.::.:|:.:....|..::. ..
Zfish   223 ELKMELPILFDSRIGCYVTVFQAVCSLRETFYKEITKNNDVLQTVMKELSAQHPDQSFVVKNFNR 287

  Fly   252 SNPIKTSSPVQSPVNKLNNANINSNYQNQITTNGGSSLANSPTSTSSSLQEPRFDSVSSTPEPRP 316
            |..:|.    :|..:.|:..::.|.|...:|.|...||              |.|:.||....||
Zfish   288 SGSLKR----RSFRDTLSPRSLKSFYDFHMTMNPRGSL--------------RRDNSSSFRSDRP 334

  Fly   317 ESPAAALVSATPSSPV---ENGVTTKSLERPELSGLNASAKATTTTQTSPTEDKAVVSEAVKPSE 378
                 |..:.:|:|||   ||           :|| :..||........|||::          |
Zfish   335 -----AYGTYSPTSPVPIYEN-----------VSG-SKGAKDNPAKVDYPTEEE----------E 372

  Fly   379 TEGAAVAASVTPAPPATPAQINGNN-NEPSIVKEGGKQPKELPSTTSNAEAAAEAAANNGNSIE- 441
            .||.:          :...|::|.| :|...|.||.|..|:..:..||.:...|::..:.|..| 
Zfish   373 EEGTS----------SNEPQVDGTNASEDKPVVEGKKDEKKESTQASNQDGQGESSEEDNNETEL 427

  Fly   442 -------EHKQKKLGNDTTVTATE 458
                   ..:||.:..|...:..|
Zfish   428 KTNSNSKNREQKPVEKDDGSSGVE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmphNP_523717.1 BAR_Amphiphysin 26..238 CDD:153272 79/211 (37%)
SH3_Amphiphysin 539..602 CDD:212724
bin2aXP_009295251.1 BAR 63..273 CDD:299863 79/211 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577738
Domainoid 1 1.000 177 1.000 Domainoid score I3543
eggNOG 1 0.900 - - E1_KOG3771
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366218at2759
OrthoFinder 1 1.000 - - FOG0001177
OrthoInspector 1 1.000 - - otm24508
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46514
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.810

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