DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amph and bin2b

DIOPT Version :10

Sequence 1:NP_523717.1 Gene:Amph / 36383 FlyBaseID:FBgn0027356 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_956090.1 Gene:bin2b / 327387 ZFINID:ZDB-GENE-030131-5598 Length:524 Species:Danio rerio


Alignment Length:594 Identity:161/594 - (27%)
Similarity:258/594 - (43%) Gaps:130/594 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MLAKSVQKHAGRAKEKILQNLGKVDRTADEIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQA 72
            :|||..||...||:||:||.|||...|.||.|::...|.|:||....||.|:...|...|:....
Zfish    20 ILAKRFQKSMNRAQEKVLQKLGKTMETKDEQFEECSANLNKQQTDGIRLYKDVKAYYNAVKVMHE 84

  Fly    73 ASKTLMDSVCEIYEPQWSGYDALQAQTGASESLWADFAHKLGDQVLIPLNTYTGQFPEMKKKVEK 137
            :||.|..::.:||||.|.|.:.|.....:.:.||.|:..||.|||:..:..||.||.::|::|.|
Zfish    85 SSKRLSQTLKDIYEPDWHGVEDLTVIMESEDLLWNDYEEKLNDQVVRTMENYTAQFQDVKERVAK 149

  Fly   138 RNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRIL 202
            |.|||:|||..||..:.||  :.|::||.|:.|..|:..:|:..:|.:|.||.:|||.||.|||.
Zfish   150 RGRKLVDYDSTRHHLEALQ--SAKKRDDAKVNKAEEEFNKAQEVFEDINKELREELPVLYQSRIS 212

  Fly   203 FLVTNLQTLFATEQVFHNETA----KIYSELEAIVDKLATES--QRGSNTLRKQTSNPIKTSSPV 261
            ..||..|.:.....||:.|.:    .||:.::.:.|:.:|:.  .:|.|:.:.:....:..|:|:
Zfish   213 CYVTMFQNISNLRDVFYKEMSMLNHNIYNMMKKLEDQHSTKPFIVKGLNSSKSKKRKSVTISAPI 277

  Fly   262 QSPVNKLNNANINSNYQNQITTNGGSSLANSPT-----STSSSLQEPRFDSVSSTPEPRPESPAA 321
            ..      |....:::......:...:||::.|     |.|:.:.|...||..|.|.        
Zfish   278 PC------NTAFPTDHPAMSKLSMPDTLAHTDTRIHTPSKSTEISESESDSFDSEPN-------- 328

  Fly   322 ALVSATPSSPVENGVTTKSLERPELSGLNASAKATTTTQTSPTEDKAVVSEAVKPSETEGAAVAA 386
                 ||             :|..|..:.:...:..|  :..|.|:.|                 
Zfish   329 -----TP-------------KRQSLCSVRSDGASENT--SGSTTDEIV----------------- 356

  Fly   387 SVTPAPPATPAQINGNNNEPSIVKEGGKQPKELPSTTSNAEAAAEAAANNGNSIEEHKQKKLGND 451
                       |.||..::.|:..|  :|.:|   .:.:::||:...|:|               
Zfish   357 -----------QANGQEHQDSVSVE--RQEEE---ESKSSQAASSEDAHN--------------- 390

  Fly   452 TTVTATETVTVTQHSVTSTDTDNIVTISDTNTDTDTKTSTGTSQKGRPVPVVNRHSVNNLNKNPF 516
                            .|||.|:           .||..:....|..|:|...|.|.:..::...
Zfish   391 ----------------ASTDGDD-----------QTKLLSADEDKPAPIPTPRRSSTSKKDEGET 428

  Fly   517 EDDDERIYEVPADANTA-DLPPGVLYRVKATYGYAKEDVDE---LSFEIGDLIRVIEYDDPEDQE 577
            :::.:...|...:..|. :.|||.||:..|   ...:|.||   |.||.||||... .||.|::.
Zfish   429 DENTKGSSEDVKEQKTEYENPPGFLYKAVA---LKSQDSDEGVLLLFEKGDLILTF-VDDEEEKP 489

  Fly   578 EGWLMGQKE 586
            :|::.|.:|
Zfish   490 DGFVWGVRE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmphNP_523717.1 BAR_Amphiphysin 26..238 CDD:153272 81/215 (38%)
PTZ00449 <275..>396 CDD:185628 18/125 (14%)
SH3_Amphiphysin 539..602 CDD:212724 19/51 (37%)
bin2bNP_956090.1 BAR_Bin2 38..248 CDD:153296 80/211 (38%)
SH3 452..522 CDD:473055 19/51 (37%)

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