Sequence 1: | NP_001246282.1 | Gene: | Sin3A / 36382 | FlyBaseID: | FBgn0022764 | Length: | 2066 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001323064.1 | Gene: | SNL4 / 843342 | AraportID: | AT1G70060 | Length: | 1326 | Species: | Arabidopsis thaliana |
Alignment Length: | 1739 | Identity: | 385/1739 - (22%) |
---|---|---|---|
Similarity: | 610/1739 - (35%) | Gaps: | 670/1739 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 GNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 328
Fly 329 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPTSTGTVHMLTGNSSMSGAGHIAIKTTNAA 393
Fly 394 TLTPAAGAGAAAAAAAVAQIQSAGAVNLMTHGGASLTQTTIHALQQATPPQSQSPGGGHVHVSVT 458
Fly 459 NSTAANAVVPGQPGISVSAHNVPQNYSRDRERATITPTGQVAGAAANVNASASIVVGGPPTPNSL 523
Fly 524 SELSPHGGAGGGPGAGAAQHNLHHIQQAHQSILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPA 588
Fly 589 KYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQVAKLFGQDEDLLREFGQFLPDATNHQS 653
Fly 654 GQYMSKSASVHNDHGKRPTATLSGGAHITMSSASPAPSGSPLHLGATTLP---QIDKSAHAAAIG 715
Fly 716 NLSAVNTSVSIKTYNNNQQQQNHVIGSGLNATR-----NDILFE---KDYHAGLQQQAHQRGAGV 772
Fly 773 GGHHHLAGTAAGANIGRPGVGASVMVSYDKEHRNNHHVQKYVGHAPNQNLTHGHNAKKSPSYGIP 837
Fly 838 SVIGSMPHISDNSLDRSSPGISYATPPLPSGPHGQHNSGSATRRPGDDSLVGHYASGAPPAKRPK 902
Fly 903 PYCRDVSFSEASSKCTISDAAFFDKVRKALRSPEVYDN--FLRCLTLFNQEIVSKTELLGLVSPF 965
Fly 966 LMKFPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGG--GSSNSSHDRGT------------ 1016
Fly 1017 ------------SHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALCREVLNDKWVS 1069
Fly 1070 FPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELDLVIE-VNSATIRVLENLQKKMSRMSTE 1133
Fly 1134 EL---SKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVLKRLKVKEEEWRE 1195
Fly 1196 AQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETLYDERHDQEDDAM----- 1255
Fly 1256 ---EPFGPHLVLPYKDKTILDDAANLLIHHVKRQTG--IQKQEKQKIKQIIRQFVPDLFFAPRQP 1315
Fly 1316 LSDDERDDAF------------------------------------------------------- 1325
Fly 1326 --PFLVDDNTKMD-----VDSPLGRTESS-------TRNAKSTPSESASPARSNASTSSVTPAGI 1376
Fly 1377 -----------------------------------------------KKETDDSK-ATTGSFAPA 1393
Fly 1394 SSAT-------ASSATPVDDATPSTSSAAAAASAASSST----VSGTEGKP-----KDDPLSSHK 1442
Fly 1443 EEGAGSTSSGVATSPRQAQDTAG--AGVDVEIK-LEHPADFSNPKLLPPHAHGQREDES---YTL 1501
Fly 1502 FFANNNWYLFLRLHAILCDRLHVMYERARLLAIEEERCRVNRRESTATALRLKPKPEIQVEDYYP 1566
Fly 1567 TFLDMLKNVLDGNMDSNTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELFA 1631
Fly 1632 TEQRRGCTGGFCRDAHKTFDREMSYQRKAESILNEENCFKVYIYKIDC------RVTIELLDSEP 1690
Fly 1691 EEVDKPAALKAQKFSKYVERL---------ANPAL---------GGGGNTGRSDSALGNDSVVDG 1737
Fly 1738 SDIKTEADE-------DTAELRYREGGIGGAGKARFLVRNKRRSKLLEE 1779 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sin3A | NP_001246282.1 | Sin3 | 238..1719 | CDD:227889 | 374/1670 (22%) |
PAH | 291..335 | CDD:280780 | 24/43 (56%) | ||
PAH | 588..645 | CDD:280780 | 21/56 (38%) | ||
PAH | 936..980 | CDD:280780 | 20/45 (44%) | ||
Sin3_corepress | 1034..1133 | CDD:285494 | 39/99 (39%) | ||
Sin3a_C | 1502..>1710 | CDD:293484 | 58/213 (27%) | ||
SNL4 | NP_001323064.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 112 | 1.000 | Domainoid score | I2056 |
eggNOG | 1 | 0.900 | - | - | E1_COG5602 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 370 | 1.000 | Inparanoid score | I567 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D253485at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000820 | |
OrthoInspector | 1 | 1.000 | - | - | otm2965 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101145 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12346 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X631 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.830 |