DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Sin3A and AT1G27250

DIOPT Version :9

Sequence 1:	NP_001246282.1	Gene:	Sin3A / 36382	FlyBaseID:	FBgn0022764	Length:	2066	Species:	Drosophila melanogaster
Sequence 2:	NP_174044.1	Gene:	AT1G27250 / 839613	AraportID:	AT1G27250	Length:	137	Species:	Arabidopsis thaliana

Alignment Length:	131	Identity:	41/131 - (31%)
Similarity:	68/131 - (51%)	Gaps:	12/131 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly   253 VGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERV 317
            |||.:...|:  .:.||...:||.:||..|:.::.:..:.|::|:.:|..||:..||..|.|:.|
plant     2 VGGGSKHVGE--GSKPRATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGCIKEV 64

  Fly   318 STLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVV----------SMPSPPGAPTSTGTVHM 372
            ..|.|||.:||.|||.|||...:|:.:....|..:.||          |:.....:.:|:.:|:.
plant    65 EQLLKGHRDLISGFNAFLPKCLEIKNYYFGAGEDLEVVYTAKRKLLARSVTKRSSSSSSSSSVYF 129

  Fly   373 L 373
            |
plant   130 L 130

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sin3A	NP_001246282.1	Sin3	238..1719	CDD:227889	41/131 (31%)
		PAH	291..335	CDD:280780	19/43 (44%)
		PAH	588..645	CDD:280780
		PAH	936..980	CDD:280780
		Sin3_corepress	1034..1133	CDD:285494
		Sin3a_C	1502..>1710	CDD:293484
AT1G27250	NP_174044.1	PAH	39..82	CDD:280780	19/42 (45%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5602
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D253485at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820