Sequence 1: | NP_001246282.1 | Gene: | Sin3A / 36382 | FlyBaseID: | FBgn0022764 | Length: | 2066 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_173833.1 | Gene: | AT1G24230 / 839037 | AraportID: | AT1G24230 | Length: | 245 | Species: | Arabidopsis thaliana |
Alignment Length: | 413 | Identity: | 80/413 - (19%) |
---|---|---|---|
Similarity: | 128/413 - (30%) | Gaps: | 189/413 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 GNATPRLKVEDALSYLDQVKYQY-ADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTEL 327
Fly 328 IYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPTSTGTVHMLTGNSSMSGAGHIAIKTTNA 392
Fly 393 ATLTPAAGAGAAAAAAAVAQIQSAGAVNLMTHGGASLTQTTIHALQQATPPQSQSPGGGHVHVSV 457
Fly 458 TNSTAANAVVPGQPGISVSAHNVPQNYSRDRERATITPTGQVAGAAANVNASASIVVGGPPTPNS 522
Fly 523 LSELSPHGGAGGGPGAGAAQHNLHHIQQAHQSILLG-----ETGQ-QNQPVEFN-------HAIT 574
Fly 575 YVNKIKNRFQ-NQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQVAKLFGQDEDLL 638
Fly 639 REFGQFLPDATNHQSGQYMSKSA 661 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sin3A | NP_001246282.1 | Sin3 | 238..1719 | CDD:227889 | 80/413 (19%) |
PAH | 291..335 | CDD:280780 | 15/43 (35%) | ||
PAH | 588..645 | CDD:280780 | 19/56 (34%) | ||
PAH | 936..980 | CDD:280780 | |||
Sin3_corepress | 1034..1133 | CDD:285494 | |||
Sin3a_C | 1502..>1710 | CDD:293484 | |||
AT1G24230 | NP_173833.1 | PAH | 32..76 | CDD:280780 | 15/43 (35%) |
PAH | 103..147 | CDD:280780 | 10/80 (13%) | ||
PAH | 186..230 | CDD:280780 | 19/56 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5602 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D253485at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12346 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |