DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sin3A and AT5G15030

DIOPT Version :10

Sequence 1:NP_001246282.1 Gene:Sin3A / 36382 FlyBaseID:FBgn0022764 Length:2066 Species:Drosophila melanogaster
Sequence 2:NP_001190312.2 Gene:AT5G15030 / 831355 AraportID:AT5G15030 Length:139 Species:Arabidopsis thaliana


Alignment Length:137 Identity:47/137 - (34%)
Similarity:60/137 - (43%) Gaps:17/137 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GNLATISQQQPVQQSPLGKAQTPPSSVVANSIPVGGT-------TPPQGQSGNATPRLKVEDALS 277
            |...|||....|..|.....:||...||..|...||.       .|..|        :.:.||.:
plant     3 GYFITISLIVDVLISHEETERTPDEIVVPRSPRHGGNIERSIYLDPSLG--------MTISDARA 59

  Fly   278 YLDQVKYQYADQPQ--IYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIYGFNMFLPPGYK 340
            ||.|||..:.|..:  .|..|..::.:||:..||...:..|:..|||.|..||.|||.||..|.|
plant    60 YLQQVKNTFIDHDERDKYAMFRKVLFDFKAQRIDRSILYARLKKLFKKHKHLIIGFNTFLSLGDK 124

  Fly   341 IEIHSDA 347
            |.:|.||
plant   125 IFLHGDA 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sin3ANP_001246282.1 Sin3 238..1719 CDD:227889 41/119 (34%)
AT5G15030NP_001190312.2 Sin3 54..>127 CDD:227889 29/72 (40%)

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