Sequence 1: | NP_001246282.1 | Gene: | Sin3A / 36382 | FlyBaseID: | FBgn0022764 | Length: | 2066 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_186781.4 | Gene: | SNL1 / 821265 | AraportID: | AT3G01320 | Length: | 1372 | Species: | Arabidopsis thaliana |
Alignment Length: | 1808 | Identity: | 389/1808 - (21%) |
---|---|---|---|
Similarity: | 604/1808 - (33%) | Gaps: | 708/1808 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 235 PLGKAQTPPSSVVANSIPVGGT----TPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNN 295
Fly 296 FLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIYGFNMFLPPGYKIEI--HSDALGCSVPVVSMP 358
Fly 359 SPPGAPTSTGTVHMLTGNSSMSGAGHIAIKTTNAATLTPAAGAGAAAAAAAVAQIQSAGAVNLMT 423
Fly 424 HGGASLTQTTIHALQQATPPQSQSPGGGHVHVSVTNSTAANAVVPGQPGISVSAHNVPQNYSRDR 488
Fly 489 ERATITPTGQVAGAAANVNASASIVVGGPPTPNSLSELSPHGGAGGGPGAGAAQHNLHHIQQAHQ 553
Fly 554 SILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKML 618
Fly 619 TEQEVYTQVAKLFGQDEDLLREFGQFLP-DATNHQSGQYMSKSASVHNDHGKRPTATLSGGAHIT 682
Fly 683 MSSASPAPSGSPLHLGATTLPQIDKSAHAAAIGNLSAVNTSVSIKTYNNNQQQQNHVIGSGLNAT 747
Fly 748 RNDILFEKDYHAGLQQQAHQRGAGVGGHHHLAGTAAGANIGRPGVGASVMVSYDKEHRNNHHVQK 812
Fly 813 YVGHAPNQNLTHGHNAKKSPSYGIPSVIGSMPHISDNSLDRSSPGISYATPPLPSGPHGQHNSGS 877
Fly 878 ATRRPGDDSLVGHYASGAPPAKRPKPYCRDVSFSEASSKCTISDAAFF--DKVRKALRSPEVYDN 940
Fly 941 FLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGG 1005
Fly 1006 GSSN---SS----------HDRGTSH-----------QSAAEY----VQDVDLSSCKRLGASYCA 1042
Fly 1043 LPQSTVPKKCSGRTALCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELD 1107
Fly 1108 LVIEVNSATIRVLENLQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMK 1172
Fly 1173 KNPFVAVPIVLKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLF 1237
Fly 1238 NEIETLYDERHDQEDDAM--------EPFGPHLVLPYKDKTILDDAANLLIHHVKRQTGIQKQEK 1294
Fly 1295 QKIKQIIRQFVPDLFFAPRQPLSDDERDDAFPFLVDD---NTK-MDVD---SPLGRTESS----T 1348
Fly 1349 RNAKSTPSESASPARSNAST--------------------------------------------- 1368
Fly 1369 ---------------------SSVT-PAG-------IKKE------------------------- 1379
Fly 1380 -----------------------TDDSKAT---------------TGSFAPASSATASSATPVDD 1406
Fly 1407 ATPSTSSAAAAASAASSSTVSGTEGKPKDDPLSSHKEEGAGSTSSGVATS---PRQAQDTAGAGV 1468
Fly 1469 DVEIKLEHPADFSNPKLLPPHAHGQRE------------------------DE---SYTLFFANN 1506
Fly 1507 NWYLFLRLHAILCDRLHVMYERARLLAIEEERCRVNRRESTATALRLKPKPEIQVEDYYPTFLDM 1571
Fly 1572 LKNVLDGNMDSNTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELFATEQRR 1636
Fly 1637 GCTGGFCRDAHKTFDREMSYQRKAESILNEENCFKVYIYKIDC-----RVTIELLDSEPEEVDKP 1696
Fly 1697 AALKAQKFSKYVE-RLANPALGGGGN----------TGRSD--SALGNDSVVDGSDIKTEADE-- 1746
Fly 1747 -----DTAELRYREGGIGGAGKARFLVRNKRRSKLLEEQVRQLFEHRRNRIEQ 1794 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sin3A | NP_001246282.1 | Sin3 | 238..1719 | CDD:227889 | 369/1709 (22%) |
PAH | 291..335 | CDD:280780 | 25/43 (58%) | ||
PAH | 588..645 | CDD:280780 | 21/56 (38%) | ||
PAH | 936..980 | CDD:280780 | 18/43 (42%) | ||
Sin3_corepress | 1034..1133 | CDD:285494 | 37/98 (38%) | ||
Sin3a_C | 1502..>1710 | CDD:293484 | 55/213 (26%) | ||
SNL1 | NP_186781.4 | Sin3 | 13..>672 | CDD:227889 | 247/1048 (24%) |
harmonin_N_like | 46..144 | CDD:299851 | 51/311 (16%) | ||
PAH | 74..118 | CDD:280780 | 25/43 (58%) | ||
PAH | 159..203 | CDD:280780 | 21/56 (38%) | ||
PAH | 353..397 | CDD:280780 | 18/43 (42%) | ||
HDAC_interact | 467..563 | CDD:214808 | 38/100 (38%) | ||
Sin3a_C | 1100..1343 | CDD:293484 | 67/289 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 112 | 1.000 | Domainoid score | I2056 |
eggNOG | 1 | 0.900 | - | - | E1_COG5602 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 370 | 1.000 | Inparanoid score | I567 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D253485at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000820 | |
OrthoInspector | 1 | 1.000 | - | - | otm2965 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101145 | |
Panther | 1 | 1.100 | - | - | O | PTHR12346 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X631 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.830 |