Sequence 1: | NP_001246282.1 | Gene: | Sin3A / 36382 | FlyBaseID: | FBgn0022764 | Length: | 2066 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937523.2 | Gene: | sin3a / 100495645 | XenbaseID: | XB-GENE-480875 | Length: | 1275 | Species: | Xenopus tropicalis |
Alignment Length: | 1832 | Identity: | 634/1832 - (34%) |
---|---|---|---|
Similarity: | 803/1832 - (43%) | Gaps: | 649/1832 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 TVSSSSQTGTIRQRTISGTQTVATAVGNLATISQQQPVQQSPLGKA---QTPPSSVVANSIPVGG 255
Fly 256 TTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTL 320
Fly 321 FKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPTSTGTVHMLTGNSSMSGAGHI 385
Fly 386 AIKTTNAATLTPAAGAGAAAAAAAVAQIQSAGAVNLMTHGGASLTQTTIHALQQATPPQSQSPGG 450
Fly 451 GHVHVSVTNSTAANAVVPGQPG---ISVSAHNVPQ----NYSRDRERATITPTGQVAGAAANVNA 508
Fly 509 SASIVVGGPPTPNSLSELSPHGG---AGGGPGAGAAQHNLHHIQQAHQSILLGETGQQNQPVEFN 570
Fly 571 HAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQVAKLFGQDE 635
Fly 636 DLLREFGQFLPDATNHQSGQYMSKSA-----SVHNDHGKRPTATLSGGAHITMSSASPAPSGSPL 695
Fly 696 HLGATTLPQIDKSAHAAAIGNLSAVNTSVSIKTYNNNQQQQNHVIGSGLNATRNDILFEKDYHAG 760
Fly 761 LQQQAHQRGAGVGGHHHLAGTAAGANIGRPGVGASVMVSYDKEHRNNHHVQKYVGHAPNQNLTHG 825
Fly 826 HNAKKSPSYGIPSVIGSMPHISDNSLDRSSPGISYATPPLPSGPHGQHNSGSATRRPGDDSLVGH 890
Fly 891 YASGAPPAKRPKPYC---RDVSFSEASSKCTISDAAFFDKVRKALRSPEVYDNFLRCLTLFNQEI 952
Fly 953 VSKTELLGLVSPFLMKFPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNSSHDRGTS 1017
Fly 1018 HQSAAEYV-QDVDLSSCKRLGASYCALPQSTVPKKCSGRTALCREVLNDKWVSFPTWASEDSTFV 1081
Fly 1082 TSRKTQFEETIYRNIHRTEDERFELDLVIEVNSATIRVLENLQKKMSRMSTEELSKFHLDDHLGG 1146
Fly 1147 TSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVLKRLKVKEEEWREAQKTFNKQWREQNEKY 1211
Fly 1212 YLKSLDHQAINFKPNDMKALRSKSLFNEIETLYDERHDQ--EDDAMEPFGPHLVLPYKDKTILDD 1274
Fly 1275 AANLLIHHVKRQTGIQKQEKQKIKQIIRQFVPDLFFAPRQPLSDDERDDAFPFLVDDNTKMDVDS 1339
Fly 1340 PLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSATASSATPV 1404
Fly 1405 DDATPSTSSAAAAASAASSSTVSGTEGKPKDDPLSSHKEEGAGSTSSGVATSPRQAQDTAGAGVD 1469
Fly 1470 VEIKLEHPADFSNPKLLPPHAHGQR---EDESYTLFFANNNWYLFLRLHAILCDRLHVMYERARL 1531
Fly 1532 LAIEEERCRVNRRE----------STATALRLKPKPEIQVEDYYPTFLDMLKNVLDGNMDSNTFE 1586
Fly 1587 DTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELFATEQRRGCTGGFCRDAHKTFD 1651
Fly 1652 REMSYQRKAESILNEENCFKVYIYKI--DCRVTIELLDSEPEEVDKPAALKAQKFSKYVERLANP 1714
Fly 1715 ALGGGGNTGRSDSALGNDSVVDGSDIKTEADEDTAELRYREGGIGGAGKARFLVRNKRRSKLLEE 1779
Fly 1780 QVRQLFEHRRNRIEQHGTAASLEPISVDSAISSNSTTGGGGSGTNNNNNNNNNNNSWGGKRLERL 1844
Fly 1845 GAPQVGLAEQYAFNDRDEISTNISNGRCFVTSKNLKLLKYDAVRRAKKSHCRVTQAKYAHFQTYV 1909
Fly 1910 NKWLQQHVSEQQQQNCVDWLLGKTADQINASGWGSASKTKTVQQKDTSKTPYRIYNRYRVVQSAV 1974
Fly 1975 SGGLMSATAPTP 1986 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sin3A | NP_001246282.1 | Sin3 | 238..1719 | CDD:227889 | 569/1519 (37%) |
PAH | 291..335 | CDD:280780 | 34/43 (79%) | ||
PAH | 588..645 | CDD:280780 | 35/56 (63%) | ||
PAH | 936..980 | CDD:280780 | 28/43 (65%) | ||
Sin3_corepress | 1034..1133 | CDD:285494 | 68/98 (69%) | ||
Sin3a_C | 1502..>1710 | CDD:293484 | 99/219 (45%) | ||
sin3a | XP_002937523.2 | Sin3 | 99..1216 | CDD:227889 | 605/1708 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 259 | 1.000 | Domainoid score | I1958 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H32124 | |
Inparanoid | 1 | 1.050 | 848 | 1.000 | Inparanoid score | I432 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D198862at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000820 | |
OrthoInspector | 1 | 1.000 | - | - | otm49335 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12346 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1023 |
SonicParanoid | 1 | 1.000 | - | - | X631 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.100 |