DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ClC-b and CLC-B

DIOPT Version :9

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_189353.1 Gene:CLC-B / 822336 AraportID:AT3G27170 Length:780 Species:Arabidopsis thaliana


Alignment Length:802 Identity:257/802 - (32%)
Similarity:400/802 - (49%) Gaps:115/802 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 MGNNSVPPDIPINGSAGSPNRNINSSEPIFHLRSRTAAASTP---------NYESLDYEVCENTL 126
            :|.||     ..||..|.|..| ..::|:  :::....:|||         :.||||||:.||.|
plant     9 IGGNS-----NYNGEGGDPESN-TLNQPL--VKANRTLSSTPLALVGAKVSHIESLDYEINENDL 65

  Fly   127 FQDEQRKRLTERFSLRKDIIRWIIFIQIGIITALIACTIDIIIEELS-------------IRKYT 178
            |:.:.||| ::...|:...::|.:...:|:.|.|||..|::.:|.::             .|..|
plant    66 FKHDWRKR-SKAQVLQYVFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGHFLTQERYVT 129

  Fly   179 FLYNSVKENVPLSDASDRDLLIPYLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVK 243
            .|...|..|:.|:              |:.|::.|.|.        |..||.|||::|:|||||.
plant   130 GLMVLVGANLGLT--------------LVASVLCVCFA--------PTAAGPGIPEIKAYLNGVD 172

  Fly   244 IPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRDD 308
            .|.:....|:.||.:|.|.:|..||..|||||::|.|:.:|:.:.||.:......:|..:.|.:|
plant   173 TPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLRYFNND 237

  Fly   309 HEKRDFVLGGGAAGVSAAFGAPIGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYHG 373
            .::||.:..|.||||.|||.:|:||:||:|||.|::|...|:|||..::.:.|    :||..:..
plant   238 RDRRDLITCGSAAGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVV----VVLREFIE 298

  Fly   374 LNDFTFTGLFNLG---KFD-TPLKFDYFELPIF--MILGVTGGLLGAAWNSLNTKI----NKFRK 428
            :.:....|||..|   .|| :.:.:.|....|.  |::||.||:||:.:|.|..|:    |...:
plant   299 ICNSGKCGLFGKGGLIMFDVSHVTYTYHVTDIIPVMLIGVIGGILGSLYNHLLHKVLRLYNLINE 363

  Fly   429 RFIPWKIGKVLEAVVVAMMGVTLACLM-IYFINDCRPLGND-----PTN----NPVQLFCEDNEY 483
            :   .||.|||.::.|::.  |..||. :.|:..|:|....     |||    |..|..|....|
plant   364 K---GKIHKVLLSLTVSLF--TSVCLYGLPFLAKCKPCDPSIDEICPTNGRSGNFKQFHCPKGYY 423

  Fly   484 NAVAALWFQTPEATVRSLF-HDPPGSHKILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAA 547
            |.:|.|...|.:..||:|| .:.|....:.:|.:|.|:|.:|...|||:....|:|:|..|:|||
plant   424 NDLATLLLTTNDDAVRNLFSSNTPNEFGMGSLWIFFVLYCILGLFTFGIATPSGLFLPIILMGAA 488

  Fly   548 WGRLL--AMLTYYVFPQAEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFPL-I 609
            :||:|  ||.:|....|      |.||::||||.:.|.:|||:||.||.:|.|  ......|: :
plant   489 YGRMLGAAMGSYTSIDQ------GLYAVLGAAALMAGSMRMTVSLCVIFLELT--NNLLLLPITM 545

  Fly   610 IALISAKWVGDYFNEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREI--LSKPVICIKIRDSANYI 672
            |.|:.||.|||.||..|||..:.:..:|.|...|.|..:.|...|:  ...||:.::..:..:.|
plant   546 IVLLIAKTVGDSFNPSIYDIILHLKGLPFLEANPEPWMRNLTVGELGDAKPPVVTLQGVEKVSNI 610

  Fly   673 YEMLKKCDHNGFPVVDDV----CGDRRSEGRVCGIILRSQLIVILLKSLYVENKRFWLPETSIQT 733
            .::||...||.|||:|:.    .|.......:.|:|||:.|:.:|.|..::..||    .|....
plant   611 VDVLKNTTHNAFPVLDEAEVPQVGLATGATELHGLILRAHLVKVLKKRWFLTEKR----RTEEWE 671

  Fly   734 FRDLYP------RFPSIKSVRKLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHL 792
            .|:.:|      |..:...|.....::...|||....|.:|..|..:.||.:...:||.:|||||
plant   672 VREKFPWDELAEREDNFDDVAITSAEMEMYVDLHPLTNTTPYTVMENMSVAKALVLFRQVGLRHL 736

  Fly   793 LVINHENR-----IAGIITRRD 809
            |::.....     :.||:||:|
plant   737 LIVPKIQASGMCPVVGILTRQD 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 CBS_pair_EriC_assoc_euk_bac 674..811 CDD:239964 44/151 (29%)
ClC_6_like 115..639 CDD:239657 193/560 (34%)
Voltage_CLC 213..620 CDD:279048 155/430 (36%)
CBS 653..811 CDD:223591 48/174 (28%)
CLC-BNP_189353.1 ClC_6_like 54..575 CDD:239657 193/560 (34%)
CBS_pair_voltage-gated_CLC_euk_bac 595..762 CDD:341367 47/168 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 238 1.000 Domainoid score I595
eggNOG 1 0.900 - - E1_COG0038
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I584
OMA 1 1.010 - - QHG53783
OrthoDB 1 1.010 - - D410280at2759
OrthoFinder 1 1.000 - - FOG0000220
OrthoInspector 1 1.000 - - otm2727
orthoMCL 1 0.900 - - OOG6_101210
Panther 1 1.100 - - O PTHR11689
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1393
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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