DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ClC-b and clcn7

DIOPT Version :9

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_012825963.1 Gene:clcn7 / 733969 XenbaseID:XB-GENE-995168 Length:800 Species:Xenopus tropicalis


Alignment Length:797 Identity:379/797 - (47%)
Similarity:514/797 - (64%) Gaps:56/797 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LARRATLSGNNHLLDD--SQPLLMGNNSVPPDIPINGSAGSP----------------NRNINSS 96
            :|::.:.||...|.:|  |.|||.|.:|.... |:.....||                |:.:..:
 Frog     4 VAKKVSWSGREQLEEDGESTPLLNGTSSAGAQ-PLRQQYSSPKLYRIGQLSTVDLTDENQELEET 67

  Fly    97 EPIFHLRSRTAAASTPN--------YESLDYEVCENTLFQDEQRKRLTERFSLRKDIIRWIIFIQ 153
            |     .|.|.....|:        ||||||:..||.||.:|:| |:........::.||:|...
 Frog    68 E-----LSTTFTKEIPHNENLLSLKYESLDYDNSENQLFMEEER-RINHAAFRTVEVTRWVICGM 126

  Fly   154 IGIITALIACTIDIIIEELSIRKYTFLYNSVKENVPLSDASDR-----DLLIPYLYWLLFSIVPV 213
            |||.|.||||.|||::|:|:..|    |..:|:|:      |:     .|....|.|...:...|
 Frog   127 IGIFTGLIACFIDIMVEKLAGVK----YQVIKDNI------DKFTEKGGLSFSLLLWAALNCAFV 181

  Fly   214 AFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIH 278
            ..|:.:|.:|||:.|||||||:|.:|||||||.:||:|||.||.:|||.||.||||.||||||||
 Frog   182 MVGSLIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLMVKVVGVILSVSGGLAVGKEGPMIH 246

  Fly   279 AGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAAGVSAAFGAPIGGMLFSLEEAAS 343
            :|||||||||||:||:..|||:||:.||.|.||||||..|.|||||||||||:||:||||||.||
 Frog   247 SGAVVAAGISQGRSTSLKKDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGAS 311

  Fly   344 FWNQNLIWRTLVASIISVFTLNIVLSAYHGL-NDFTFTGLFNLGKFDT-PLKFDYFELPIFMILG 406
            ||||.|.||...||:||.||||..||.|:.. .|.:..||.|.|:||| ...:.||||||||.:|
 Frog   312 FWNQLLTWRIFFASMISTFTLNFFLSIYNQKPGDLSNPGLINFGRFDTDENSYQYFELPIFMFMG 376

  Fly   407 VTGGLLGAAWNSLNTKINKFRKRFIPWKIGKVLEAVVVAMMGVTLACLMIYFINDCRPLGNDPTN 471
            ..||:|||.:|:||..:..||.|:|..:..:|:||::||.:..|:|.:.||:..||:||..|.|:
 Frog   377 AVGGMLGALFNALNHCLTTFRIRYIHRRFLQVIEAMLVAAVTATVAFVTIYYSTDCQPLRQDDTD 441

  Fly   472 NPVQLFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHKILTLALFTVVYYVLSCATFGLNVSLG 536
            .|:||||.|.||||:|:.:|.|||.:||.||||||||....||.:||::|:.|:|.|:||.||.|
 Frog   442 YPLQLFCADGEYNAMASAFFTTPEKSVRRLFHDPPGSFNPQTLGVFTILYFFLACWTYGLTVSAG 506

  Fly   537 VFIPTALVGAAWGRLLAMLTYYVFPQAEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVE 601
            ||||:.|:|||||||..:|...|.....:..||||||:||||.|||::|||:||:||::|.|| .
 Frog   507 VFIPSLLLGAAWGRLFGILLTIVPNGVSWADPGKYALMGAAAQLGGIVRMTLSLTVIMVEATG-N 570

  Fly   602 TSFFFPLIIALISAKWVGDYFNEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREILSKPVICIKIR 666
            .::.||:::.||:||.|||||.||:||..|::..||.|.||.......|.|||::|.||:.::.|
 Frog   571 VTYGFPIMLVLITAKLVGDYFVEGLYDLHIKLQSVPFLHWEAPVTSHSLTAREVMSTPVVWLRRR 635

  Fly   667 DSANYIYEMLK--KCDHNGFPVVDDVCGDRRSEGRVCGIILRSQLIVILLKSLYVENKRFWLPE- 728
            :....|.::|.  ..:|||||||::.. |.....|:||:||||||||:|...::||.:...|.: 
 Frog   636 EKVGVIVDILSDTSSNHNGFPVVENTV-DSSRPSRLCGMILRSQLIVLLKHKVFVERENLSLVQR 699

  Fly   729 -TSIQTFRDLYPRFPSIKSVRKLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHL 792
             ..::.|||.|||||.|:|:....::....:||:.||||:|..|....|:||:|::|||||||||
 Frog   700 RLKLKDFRDAYPRFPPIQSIHVSQDERECQMDLTEFMNPTPYTVPQDASLPRVFKLFRALGLRHL 764

  Fly   793 LVINHENRIAGIITRRD 809
            :|:::.||:.|::||:|
 Frog   765 VVVDNHNRVVGLVTRKD 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 CBS_pair_EriC_assoc_euk_bac 674..811 CDD:239964 62/140 (44%)
ClC_6_like 115..639 CDD:239657 285/530 (54%)
Voltage_CLC 213..620 CDD:279048 238/408 (58%)
CBS 653..811 CDD:223591 69/161 (43%)
clcn7XP_012825963.1 ClC_6_like 89..614 CDD:239657 288/536 (54%)
Voltage_CLC 179..589 CDD:279048 238/410 (58%)
CBS_pair_EriC_assoc_euk_bac 632..785 CDD:239964 64/151 (42%)
CBS 734..>790 CDD:223591 26/48 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56546
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311775at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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