DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and clcn7

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_012825963.1 Gene:clcn7 / 733969 XenbaseID:XB-GENE-995168 Length:800 Species:Xenopus tropicalis


Alignment Length:797 Identity:379/797 - (47%)
Similarity:514/797 - (64%) Gaps:56/797 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LARRATLSGNNHLLDD--SQPLLMGNNSVPPDIPINGSAGSP----------------NRNINSS 96
            :|::.:.||...|.:|  |.|||.|.:|.... |:.....||                |:.:..:
 Frog     4 VAKKVSWSGREQLEEDGESTPLLNGTSSAGAQ-PLRQQYSSPKLYRIGQLSTVDLTDENQELEET 67

  Fly    97 EPIFHLRSRTAAASTPN--------YESLDYEVCENTLFQDEQRKRLTERFSLRKDIIRWIIFIQ 153
            |     .|.|.....|:        ||||||:..||.||.:|:| |:........::.||:|...
 Frog    68 E-----LSTTFTKEIPHNENLLSLKYESLDYDNSENQLFMEEER-RINHAAFRTVEVTRWVICGM 126

  Fly   154 IGIITALIACTIDIIIEELSIRKYTFLYNSVKENVPLSDASDR-----DLLIPYLYWLLFSIVPV 213
            |||.|.||||.|||::|:|:..|    |..:|:|:      |:     .|....|.|...:...|
 Frog   127 IGIFTGLIACFIDIMVEKLAGVK----YQVIKDNI------DKFTEKGGLSFSLLLWAALNCAFV 181

  Fly   214 AFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIH 278
            ..|:.:|.:|||:.|||||||:|.:|||||||.:||:|||.||.:|||.||.||||.||||||||
 Frog   182 MVGSLIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLMVKVVGVILSVSGGLAVGKEGPMIH 246

  Fly   279 AGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAAGVSAAFGAPIGGMLFSLEEAAS 343
            :|||||||||||:||:..|||:||:.||.|.||||||..|.|||||||||||:||:||||||.||
 Frog   247 SGAVVAAGISQGRSTSLKKDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGAS 311

  Fly   344 FWNQNLIWRTLVASIISVFTLNIVLSAYHGL-NDFTFTGLFNLGKFDT-PLKFDYFELPIFMILG 406
            ||||.|.||...||:||.||||..||.|:.. .|.:..||.|.|:||| ...:.||||||||.:|
 Frog   312 FWNQLLTWRIFFASMISTFTLNFFLSIYNQKPGDLSNPGLINFGRFDTDENSYQYFELPIFMFMG 376

  Fly   407 VTGGLLGAAWNSLNTKINKFRKRFIPWKIGKVLEAVVVAMMGVTLACLMIYFINDCRPLGNDPTN 471
            ..||:|||.:|:||..:..||.|:|..:..:|:||::||.:..|:|.:.||:..||:||..|.|:
 Frog   377 AVGGMLGALFNALNHCLTTFRIRYIHRRFLQVIEAMLVAAVTATVAFVTIYYSTDCQPLRQDDTD 441

  Fly   472 NPVQLFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHKILTLALFTVVYYVLSCATFGLNVSLG 536
            .|:||||.|.||||:|:.:|.|||.:||.||||||||....||.:||::|:.|:|.|:||.||.|
 Frog   442 YPLQLFCADGEYNAMASAFFTTPEKSVRRLFHDPPGSFNPQTLGVFTILYFFLACWTYGLTVSAG 506

  Fly   537 VFIPTALVGAAWGRLLAMLTYYVFPQAEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVE 601
            ||||:.|:|||||||..:|...|.....:..||||||:||||.|||::|||:||:||::|.|| .
 Frog   507 VFIPSLLLGAAWGRLFGILLTIVPNGVSWADPGKYALMGAAAQLGGIVRMTLSLTVIMVEATG-N 570

  Fly   602 TSFFFPLIIALISAKWVGDYFNEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREILSKPVICIKIR 666
            .::.||:::.||:||.|||||.||:||..|::..||.|.||.......|.|||::|.||:.::.|
 Frog   571 VTYGFPIMLVLITAKLVGDYFVEGLYDLHIKLQSVPFLHWEAPVTSHSLTAREVMSTPVVWLRRR 635

  Fly   667 DSANYIYEMLK--KCDHNGFPVVDDVCGDRRSEGRVCGIILRSQLIVILLKSLYVENKRFWLPE- 728
            :....|.::|.  ..:|||||||::.. |.....|:||:||||||||:|...::||.:...|.: 
 Frog   636 EKVGVIVDILSDTSSNHNGFPVVENTV-DSSRPSRLCGMILRSQLIVLLKHKVFVERENLSLVQR 699

  Fly   729 -TSIQTFRDLYPRFPSIKSVRKLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHL 792
             ..::.|||.|||||.|:|:....::....:||:.||||:|..|....|:||:|::|||||||||
 Frog   700 RLKLKDFRDAYPRFPPIQSIHVSQDERECQMDLTEFMNPTPYTVPQDASLPRVFKLFRALGLRHL 764

  Fly   793 LVINHENRIAGIITRRD 809
            :|:::.||:.|::||:|
 Frog   765 VVVDNHNRVVGLVTRKD 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 285/530 (54%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 70/162 (43%)
CBS repeat 657..763 CDD:341367 41/109 (38%)
CBS repeat 769..812 CDD:341367 21/41 (51%)
clcn7XP_012825963.1 ClC_6_like 89..614 CDD:239657 288/536 (54%)
CBS_pair_voltage-gated_CLC_euk_bac 620..785 CDD:341367 70/163 (43%)
CBS repeat 626..735 CDD:341367 41/109 (38%)
CBS repeat 741..784 CDD:341367 21/41 (51%)

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