DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ClC-b and clcn6

DIOPT Version :9

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_009302552.1 Gene:clcn6 / 568122 ZFINID:ZDB-GENE-030131-2056 Length:863 Species:Danio rerio


Alignment Length:822 Identity:293/822 - (35%)
Similarity:425/822 - (51%) Gaps:135/822 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 NYESLDYEVCENTLFQDEQRKRLTERFSLRKDIIRWIIFIQIGIITALIACTIDIIIEELSIRKY 177
            :||||||:.|.|..|. |..:.|..:.:.:.:.|:||:...||:.|.|....:|..:...:..|:
Zfish    43 DYESLDYDRCINEPFL-EVLEGLDNKKARKYEAIKWILVFAIGVSTGLTGLFVDFFVRLFTQLKF 106

  Fly   178 TFLYNSVKENVPLSDASDRDLLIPYLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGV 242
            ..:..||:|      .|:...|...|..||...:...|.::::..|||:.||||||::|||||||
Zfish   107 NVVGQSVEE------CSENGCLALSLLELLALNMMFVFISSVLVLIEPVAAGSGIPEIKSYLNGV 165

  Fly   243 KIPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRD 307
            |:|.|||::|...|..||:.:|.|||..||||||||:||:|.||:.|.:|.||.|....|..||.
Zfish   166 KVPGIVRLRTFICKVTGVLFAVAGGLFVGKEGPMIHSGAIVGAGLPQFQSITFKKIRFHFPYFRS 230

  Fly   308 DHEKRDFVLGGGAAGVSAAFGAPIGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYH 372
            |.:|||||..|.||||:|||||||||.||||||.:|||||.|.|:.|..|:.:.||||...|   
Zfish   231 DRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQALTWKVLFCSMSATFTLNFFRS--- 292

  Fly   373 GLN-----DFTFTGLFNLGKFDTP------LKFDYFELPIFMILGVTGGLLGAAWNSLNTKINKF 426
            |:|     .|...||.|.|:|..|      ..:...:|..|:::||.||||||.:|.:|.::.|:
Zfish   293 GINFSKWGSFQLPGLLNFGEFKCPDGDKACHLWTAVDLAFFVLMGVAGGLLGALFNCINKRLAKY 357

  Fly   427 RKRFIPWKIG--KVLEAVVVAMMGVTLACLMIYFINDCRPLGNDPTNNPV--------------Q 475
            |.|.:..|..  :|||:::|.|:...:..:....:.:||.|.::..||..              :
Zfish   358 RMRNVHPKARFIRVLESLLVCMVTTLVIFMSSMTLGECRDLVSNVNNNTSTQGSVNEEVNSTIRR 422

  Fly   476 LFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHKILTLALFTVVYYVLSCATFGLNVSLGVFIP 540
            .||.:|.||.:|.|:|...|..:..|||. ..:...:||:||.|:|:.|||.|:|::|..|:|:|
Zfish   423 FFCYNNTYNDMATLFFNPQEVAIHQLFHQ-NATFSPVTLSLFFVLYFFLSCWTYGVSVPSGLFVP 486

  Fly   541 TALVGAAWGRLLAMLTYYVFPQAEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFF 605
            :.|.||:.|||||.:....|...  ::.|.:|||||||.||||:||||||:|||:|:|. |.::.
Zfish   487 SLLCGASLGRLLANVLKINFHMQ--IYSGTFALIGAAAFLGGVVRMTISLTVILIESTN-EITYG 548

  Fly   606 FPLIIALISAKWVGDYFNEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREILSKPVICIKIRDSAN 670
            .|::|.|:.|||.||:||.||||..|.:..||:|.||...:...|.|.:|:...:..:.......
Zfish   549 LPIMITLMVAKWTGDFFNRGIYDIHIHLKGVPLLEWETEVEMDKLTASDIMEPNLTYVYPHTRIQ 613

  Fly   671 YIYEMLKKCDHNGFPVVDD----------------------------VCGDRR-----------S 696
            .:..:|:...::.||||.:                            ..|::|           |
Zfish   614 SLVSILRTTVYHAFPVVTENRDNEKEFMKGNILISNNIKFKKTSVLTRAGEQRRRCQSMKSYPSS 678

  Fly   697 EGR-VC----------------------------------------------------GIILRSQ 708
            |.| ||                                                    |:|||||
Zfish   679 ELRNVCDEHVVVEPTEEGQDILQQMLERRHAPYPNLYPDQSPSEEWTMEERFRPLTFHGLILRSQ 743

  Fly   709 LIVILLKSL-YVENK-RFWLPETSIQTFRDLYPRFPSIKSVRKLDEKINYTVDLSMFMNPSPIRV 771
            |:.:|::.: |.||: ....|..|.....:.|||||.|..:..........||::.:|||.|..|
Zfish   744 LVNLLIRGVCYAENQSSASQPRLSHSEMTEDYPRFPDIHDLDLALLNPRMIVDVTPYMNPCPYTV 808

  Fly   772 NPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRRDFIYK 813
            :|:..|.::|.:||.:|||||.|:|....|.|||||.:..::
Zfish   809 SPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIITRHNLTHE 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 CBS_pair_EriC_assoc_euk_bac 674..811 CDD:239964 56/230 (24%)
ClC_6_like 115..639 CDD:239657 230/550 (42%)
Voltage_CLC 213..620 CDD:279048 192/433 (44%)
CBS 653..811 CDD:223591 57/251 (23%)
clcn6XP_009302552.1 ClC_6_like 45..582 CDD:239657 230/550 (42%)
Voltage_CLC 135..564 CDD:279048 193/435 (44%)
CBS 595..>633 CDD:278968 7/37 (19%)
CBS_pair_EriC_assoc_euk_bac 688..847 CDD:239964 44/158 (28%)
CBS 797..>847 CDD:223591 23/49 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0038
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53783
OrthoDB 1 1.010 - - D311775at33208
OrthoFinder 1 1.000 - - FOG0000220
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101210
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1393
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.730

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