DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and SPOM_SPBC19C7.11

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_596167.2 Gene:SPOM_SPBC19C7.11 / 2540750 PomBaseID:SPBC19C7.11 Length:766 Species:Schizosaccharomyces pombe


Alignment Length:705 Identity:195/705 - (27%)
Similarity:322/705 - (45%) Gaps:102/705 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 WIIFIQIGIITALIACTIDIIIEELS-IRK-YT---FLYNS-----VKENVPLSDASDR----DL 198
            |.|...||......|..:||:...|| ||: |.   :.||.     ..|.:..|..:.:    ..
pombe    79 WFILSIIGTTVGFAAYMLDIVTSWLSDIRRGYCTSHWYYNEKFCCWYSETMGSSCTAWKPWTYKF 143

  Fly   199 LIPYLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITS 263
            .:.||.:..|:::.|...|.||..:.|:.|||||.::|..::|......:..:.:.||.:|:..:
pombe   144 SLNYLIYTAFALLFVLCAAIMVRDVAPLAAGSGISEIKCIISGFLRDSFLSFRVMLVKCVGLPLA 208

  Fly   264 VVGGLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEK-RDFVLGGGAAGVSAAF 327
            :..||:.|||||.:|....:...||           :|||..|:...: ||..:...|:||:.||
pombe   209 IASGLSVGKEGPSVHLATTIGHNIS-----------KIFKYAREGSIRYRDICVASAASGVAVAF 262

  Fly   328 GAPIGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYHGLNDFTFTGLFNLGKFDTPL 392
            |:||||:||.:||.:..::..:|       :.|.|.....:...|.||.|. ||...|.:.....
pombe   263 GSPIGGVLFGIEEMSGGYDPKMI-------VYSFFCCLSAVGVLHMLNPFR-TGQVVLFEVRYSG 319

  Fly   393 KFDYFELPIFMILGVTGGLLGAAWNSLNTKINKFRKRFIP-WKIGKVLEAVVVAMMGVTLACLMI 456
            .:.:|||..|..||:.|||.|.....|...|.|.||:::. |   .||:|..     ||:...::
pombe   320 SWHFFELLFFCFLGIFGGLYGEFVMRLFFLIQKLRKKYLSRW---GVLDAAF-----VTVITSLV 376

  Fly   457 YFINDCRPLGNDPTNNPVQLFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHKILTLALFTVVY 521
            .|:|....|  |.|.....||.|....::...:....|....::..        :|.:|.|....
pombe   377 SFLNPWLRL--DMTLGMELLFQECKSSSSPELINLCDPSLRTKNTI--------LLLIATFARTI 431

  Fly   522 YVLSCATFGLNVSLGVFIPTALVGAAWG---RLLAMLTYYVFPQA----------EFLHPGKYAL 573
            :|  ..::|..|..|:|:|:..|||::|   .|:|.:.|..||.:          ..:.||.|||
pombe   432 FV--TFSYGAKVPAGIFVPSMAVGASFGYMIGLIAEMIYQRFPNSVLFLACHGSESCITPGTYAL 494

  Fly   574 IGAAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALISAKWVGDYFNE-GIYDTQIQVNHVP 637
            :||||:|.|::.:|:::.||:.|.||. .:|..|.::.:..|..:|:...: ||.|..|::|.:|
pombe   495 LGAAASLSGIMHLTVTIVVIMFELTGA-LNFILPTVLVVALANSIGNMLGKTGIADRSIEINGLP 558

  Fly   638 MLTWEPLPQYK-----GLKAREILSKPVICI-KIRDSANYIYEMLKKCDHNGFPVVDDVCGDRRS 696
            :|  ||.....     .:...|:::..:|.| .|..:...:..|::..|.:|:|||    .|.||
pombe   559 LL--EPEKSINSSNTINIPITEVMASNLITIPSIGFTWRKLLGMMEGYDFSGYPVV----LDSRS 617

  Fly   697 EGRVCGIILRSQLIVILLKSLYVENKRFWLPETSIQTFRDLYPRFPSIKSV-----RKLDEKINY 756
             ..:.|.:.:|.     |||.:...|.    |.|. || |....|..:.||     .|..|  :.
pombe   618 -NYLIGYLKKSS-----LKSSFEAAKL----EPSF-TF-DQQLCFGKVDSVGDSKSSKFGE--SD 668

  Fly   757 TVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRRDFI 811
            .:|||.:|:.:||.|....|:..:..:|..|. ..::.|..:..:.|:|:::|.:
pombe   669 RIDLSAYMDVNPISVLHTQSIANVAVLFEVLS-PSVIFIEKDGNLVGLISKKDLL 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 149/520 (29%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 43/166 (26%)
CBS repeat 657..763 CDD:341367 31/111 (28%)
CBS repeat 769..812 CDD:341367 9/43 (21%)
SPOM_SPBC19C7.11NP_596167.2 ClC_3_like 86..560 CDD:239656 146/513 (28%)
CBS_pair_voltage-gated_CLC_euk_bac 575..724 CDD:341367 43/167 (26%)
CBS repeat 581..675 CDD:341367 31/111 (28%)
CBS repeat 681..723 CDD:341367 9/43 (21%)

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