DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and ClC-c

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_061502675.1 Gene:ClC-c / 1276446 VectorBaseID:AGAMI1_008441 Length:927 Species:Anopheles gambiae


Alignment Length:778 Identity:216/778 - (27%)
Similarity:371/778 - (47%) Gaps:147/778 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 NYESLDYEVCENTLFQDEQRKRLTERFSLRK------DIIR--------WIIFIQIGIITALIAC 163
            ::.::|::       :|..|.|:..|:.::|      |:::        |:..:.:|:.|..:|.
Mosquito   201 DFHTIDWQ-------RDIARDRMRHRYIVKKRQDSFWDLLKGAHDAWSGWVCVLLVGLFTGCVAG 258

  Fly   164 TIDIIIEELSIRKY-----TFLYNSVK----ENVPLSDA--------------SDRD----LLIP 201
            .|||....::..|:     .|..|..:    .|....|:              |.|:    .:|.
Mosquito   259 VIDIGASWMTDLKFGICPQAFWLNREQCCWSSNETSFDSGNCSQWYAWSEIFTSSREGFGAYVIS 323

  Fly   202 YLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVG 266
            |.::::::::.....|::|....|...|||||::|:.|:|..|...:...||.:|::|::.||..
Mosquito   324 YFFYIMWAMLFALLAASLVRMFAPYACGSGIPEIKTILSGFIIRSYLGKWTLIIKSVGIMLSVSA 388

  Fly   267 GLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAF-RDDHEKRDFVLGGGAAGVSAAFGAP 330
            ||:.||||||:|..:.:      |...::|     |..: |::.:||:.:....|||||.|||||
Mosquito   389 GLSLGKEGPMVHIASCI------GNILSYL-----FPKYGRNEAKKREILSAAAAAGVSVAFGAP 442

  Fly   331 IGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYHGLNDF--TFTGLFNLGKFDTPLK 393
            |||:||||||.:.::....:||:...::|:.|.|       ..:|.|  ..:.||.: :::.|  
Mosquito   443 IGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFIL-------RSINPFGNEHSVLFYV-EYNKP-- 497

  Fly   394 FDYFELPIFMILGVTGGLLGAAWNSLNTKINKFRKRFIPWKIGK--VLEAVVVAMMGVTLA---- 452
            :.:|||..|:.||:.||::...:...|....:|||..   |:|:  |.|.::|..:...:|    
Mosquito   498 WIFFELVPFIGLGIIGGIIATLFIKANLWWCRFRKYS---KLGQYPVTEVLIVTFITAVIAYPNP 559

  Fly   453 ------CLMIYFI-NDCRPLGNDPTNNPVQLFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHK 510
                  ..:||.: :.|.....||..:..:.|.:.|....:||.               .||.:|
Mosquito   560 YTRMNTSELIYLLFSQCGISNQDPLCDYNRNFTDVNSAIEIAAA---------------GPGVYK 609

  Fly   511 ---ILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAML---TYYVFPQA------ 563
               :|.|||  .:..:::..|||:.|..|:|||:..:||..||::.:.   ..|.:|:.      
Mosquito   610 AVWLLILAL--AMKLIMTIFTFGMKVPCGLFIPSLALGAITGRIVGIAMEQLAYNYPKIWIFSGE 672

  Fly   564 -----EFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALISAKWVGDYF- 622
                 :.:.||.||::||||.||||.|||:||.||:.|.|| ...:..||:.|.:::|||||.. 
Mosquito   673 CSTGDDCITPGLYAMVGAAAVLGGVTRMTVSLVVIMFELTG-GVRYIVPLMAAAMASKWVGDALG 736

  Fly   623 NEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREILSK--PVICIKIRDS--ANYIYEMLKKCDHNG 683
            .:||||..|.:|..|.|..:...|:..|.|..:..|  ..:.:..:||  .:.|..:||:.:|||
Mosquito   737 RQGIYDAHIALNGYPFLDSKDEFQHTTLAADVMQPKRNETLAVITQDSMTVDDIETLLKETEHNG 801

  Fly   684 FPVVDDVCGDRRSEGRVCGIILRSQLIVILLKSLYVENKRFWLPETSIQTFRDLYPRFPSIKSVR 748
            :|||..     :....:.|.:||..|      :|.:.|.|..:...:.|:.    ..|.|.:.|:
Mosquito   802 YPVVVS-----KENQYLVGFVLRRDL------NLALANARRIIDGITGQSL----VIFTSAQPVQ 851

  Fly   749 KLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRRDFI 811
            .|...   .:.|...::.:||.|.....:..:..:||.||||..|| .|..|:.|:||::|.:
Mosquito   852 NLGPS---PLKLKKILDMAPITVTDQTPMETVVDMFRKLGLRQTLV-THNGRLLGVITKKDVL 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 170/598 (28%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 43/164 (26%)
CBS repeat 657..763 CDD:341367 25/109 (23%)
CBS repeat 769..812 CDD:341367 16/43 (37%)
ClC-cXP_061502675.1 None

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