DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and CLCNKB

DIOPT Version :9

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_000076.2 Gene:CLCNKB / 1188 HGNCID:2027 Length:687 Species:Homo sapiens


Alignment Length:721 Identity:172/721 - (23%)
Similarity:309/721 - (42%) Gaps:148/721 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 FSLRKDIIRWIIFIQIGIITALIACTIDIIIEELSIRKYTFLYNSVKENVPLSDASDRDLLIPYL 203
            |.|.:|   |...:.:|::.||::|.:|:.:|.: :|.:.:||..:.::          .|:.||
Human    44 FRLGED---WYFLMTLGVLMALVSCAMDLAVESV-VRAHQWLYREIGDS----------HLLRYL 94

  Fly   204 YWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVGG- 267
            .|.::.:..|:|.:.....|.|.:.|||||:||:.|.||.:...:.||....|.:|:..::..| 
Human    95 SWTVYPVALVSFSSGFSQSITPSSGGSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCTLACGS 159

  Fly   268 -LAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAAGVSAAFGAPI 331
             |..||.||.:|...::||.:.:.::||..:.       .:..::.:.::...|.||:..|.||.
Human   160 TLFLGKVGPFVHLSVMMAAYLGRVRTTTIGEP-------ENKSKQNEMLVAAAAVGVATVFAAPF 217

  Fly   332 GGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYHGLNDFTFTGLFNLG-KFDTPLKFD 395
            .|:|||:|..:|.::....||...|:....|...: |:.::...: |.|.|:... :.|.|  ||
Human   218 SGVLFSIEVMSSHFSVWDYWRGFFAATCGAFMFRL-LAVFNSEQE-TITSLYKTSFRVDVP--FD 278

  Fly   396 YFELPIFMILGVTGGLLGAAW-------------NSLNTKINKFRKRFIPWKIGKVLEAVVVAMM 447
            ..|:..|:.||...|:||:|:             |..::|:....|     .:...|..:|:|.:
Human   279 LPEIFFFVALGGLCGILGSAYLFCQRIFFGFIRNNRFSSKLLATSK-----PVYSALATLVLASI 338

  Fly   448 ------GVTLAC-------LMIYFINDCRPLGNDPTNN-----PVQLFCEDNEYNAVAALWFQ-- 492
                  |..||.       |...|.|....|   .|.|     |.:|   |.::     ||::  
Human   339 TYPPSAGRFLASRLSMKQHLDSLFDNHSWAL---MTQNSSPPWPEEL---DPQH-----LWWEWY 392

  Fly   493 TPEATVRSLFHDPPGSHKILTLALFTVV-YYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAMLT 556
            .|..|:..            |||.|.|: :::|..|| .:.:..|.|:|..:.|||.|||.....
Human   393 HPRFTIFG------------TLAFFLVMKFWMLILAT-TIPMPAGYFMPIFVYGAAIGRLFGETL 444

  Fly   557 YYVFPQ-------AEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALIS 614
            .::||:       ...:.||.|||.|||| ..|.:..|||.:::..|.|| :.....|:::|:::
Human   445 SFIFPEGIVAGGITNPIMPGGYALAGAAA-FSGAVTHTISTALLAFEVTG-QIVHALPVLMAVLA 507

  Fly   615 AKWVGDYFNEGIYDTQIQVNHVPMLTWEPLPQYKG-------LKAREILSKPVICIKIRDSANYI 672
            |..:........||..:.|..:|.     ||:..|       ::....::..:..:........:
Human   508 ANAIAQSCQPSFYDGTVIVKKLPY-----LPRILGRNIGSHRVRVEHFMNHSITTLAKDMPLEEV 567

  Fly   673 YEMLKKCDHNGFPVVDDVCGDRRSEGRV-CGIILRSQLIVILLKSLYVENKRFWLPETSIQTFRD 736
            .:::...|...:|:|:.      :|.:: .||:.|:||:    ::|..|... |.|... |..:|
Human   568 VKVVTSTDVAKYPLVES------TESQILVGIVRRAQLV----QALKAEPPS-WAPGHQ-QCLQD 620

  Fly   737 -LYPRFPSIKSVRKLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVINHENR 800
             |....|:                     .|..::::|..|:.....:|..|.| |.|.:....|
Human   621 ILAAGCPT---------------------EPVTLKLSPETSLHEAHNLFELLNL-HSLFVTSRGR 663

  Fly   801 IAGIIT 806
            ..|.::
Human   664 AVGCVS 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 CBS_pair_EriC_assoc_euk_bac 674..811 CDD:239964 27/135 (20%)
ClC_6_like 115..639 CDD:239657 142/543 (26%)
Voltage_CLC 213..620 CDD:279048 121/450 (27%)
CBS 653..811 CDD:223591 27/156 (17%)
CLCNKBNP_000076.2 ClC_1_like 49..534 CDD:239655 141/545 (26%)
Voltage_CLC 106..513 CDD:279048 120/448 (27%)
CBS_pair_EriC_assoc_euk_bac 555..676 CDD:239964 27/149 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0038
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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