DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp301a1 and Cyp27a1

DIOPT Version :9

Sequence 1:NP_610796.1 Gene:Cyp301a1 / 36378 FlyBaseID:FBgn0033753 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_849178.2 Gene:Cyp27a1 / 301517 RGDID:727915 Length:533 Species:Rattus norvegicus


Alignment Length:534 Identity:143/534 - (26%)
Similarity:237/534 - (44%) Gaps:81/534 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RISGAGSRRAQCRESSTGVATCP-HLADSEEASA-------PRIHSTSEWQNALPYNQIPGPKPI 81
            |:.|.|    .|.:.:...|..| .|.|.|....       ||:.|.:|         :|||   
  Rat    17 RVMGHG----LCPQGARAKAAIPAALRDHESTEGPGTGQDRPRLRSLAE---------LPGP--- 65

  Fly    82 PILGNTWRLMPIIGQYTISDVAKISSLLHDRYGRIVRFGGLIGRPDLLFIYDADEIEKCYRSEGP 146
               |....|..:..:..:..:.::.:|...:||.:  :....|....:.:..|..:|:..|.||.
  Rat    66 ---GTLRFLFQLFLRGYVLHLHELQALNKAKYGPM--WTTTFGTRTNVNLASAPLLEQVMRQEGK 125

  Fly   147 TPFRPSMPSLVKYKSVVRKDFFGDLGGVVGVHGEPWREFRSRVQKPVLQLSTIRRYLQPLEVITE 211
            .|.|.||....::     :|..|...|:....|:.|...|..:.:.:|:.:....|...|..:..
  Rat   126 YPIRDSMEQWKEH-----RDHKGLSYGIFITQGQQWYHLRHSLNQRMLKPAEAALYTDALNEVIS 185

  Fly   212 DFLVRCENLLDEN---QELPEDFDNEIHKWSLECIGRVALDTRLGCLESNLKPDSEPQQIIDAAK 273
            ||:.|.:.:..|:   .::| |..:.::..:||.|..:..:.|:||||.::     |:   |.|.
  Rat   186 DFIARLDQVRTESASGDQVP-DVAHLLYHLALEAICYILFEKRVGCLEPSI-----PE---DTAT 241

  Fly   274 YALRNVATLELKAPYWRYFP------TPLWTRYVKNMNFFVGVCMKYIQSATERLKTQDPSLRAG 332
            : :|:|..:...:.|..:.|      .|.|.||:.|.:.......|.|....:.::.|   |:|.
  Rat   242 F-IRSVGLMFKNSVYVTFLPKWSRPLLPFWKRYMNNWDNIFSFGEKMIHQKVQEIEAQ---LQAA 302

  Fly   333 EPS----------LVEKVILSQKDEKIATIMALDLILVGIDTISMAVCSMLYQLATRPVDQQKVH 387
            .|.          |:.|.:||.: |.:.|..  :|||.|:||.|..:...||.|:..|..|:.:|
  Rat   303 GPDGVQVSGYLHFLLTKELLSPQ-ETVGTFP--ELILAGVDTTSNTLTWALYHLSKNPEIQEALH 364

  Fly   388 EELKRLLPDPNTPLT-----IPLLDQMHHLKGFIKEVFRMYSTVIGNGRTLME-DSVICGYQVPK 446
            :|:..::|....|..     :||      ||..|||..|:|..|..|.|.:.| ::.|.|:..||
  Rat   365 KEVTGVVPFGKVPQNKDFAHMPL------LKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPK 423

  Fly   447 GVQAVFPTIVTGNMEEYVTDAATFRPERWLKPQHGGTPGKLHPFASLPYGYGARMCLGRRFADLE 511
            ..|.|....|.........:..:|:|.|||:.:.....|..|||.|:|:|||.|.|||||.|:||
  Rat   424 NTQFVLCHYVVSRDPSVFPEPESFQPHRWLRKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELE 488

  Fly   512 MQILLAKLLRNYKL 525
            ||:||::|::.|::
  Rat   489 MQLLLSRLIQKYEV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp301a1NP_610796.1 p450 76..530 CDD:299894 130/475 (27%)
Cyp27a1NP_849178.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..58 5/19 (26%)
cytochrome_P450 91..527 CDD:425388 124/441 (28%)
Sterol-binding. /evidence=ECO:0000255 386..400 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3026
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3706
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8942
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

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