DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fra and Igsf9

DIOPT Version :9

Sequence 1:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster
Sequence 2:NP_001139272.1 Gene:Igsf9 / 93842 MGIID:2135283 Length:1179 Species:Mus musculus


Alignment Length:1104 Identity:216/1104 - (19%)
Similarity:345/1104 - (31%) Gaps:403/1104 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 RPALVAIVRQPDLNQDFLETYLLPGQTAYFRC-MLGEANWQEGVKHSVQWLKDDLPLPL------ 191
            :|.:|::|.:             .|::|...| :|..|.  ....|.::||:....||:      
Mouse    23 KPEVVSVVGR-------------AGESAVLGCDLLPPAG--HPPLHVIEWLRFGFLLPIFIQFGL 72

  Fly   192 -------DKLRMVVLPNGA-LEIDEVGPSDRGSYQCNV------TSGSSSRLSSKTNLNIKKPSD 242
                   |.:..|.|..|| |:|:.:...|:|.|:|.|      :........|..:|.:..|  
Mouse    73 YSPRIDPDYVGRVRLQTGASLQIEGLRVEDQGWYECRVLFLDQHSPEQDFANGSWVHLTVNSP-- 135

  Fly   243 PGAENSVAPSFL-VGPSPKTVREGDTVTLDCVANGVPKPQIKWLRNGMDLDFNDLDSRFSIVGTG 306
                    |.|. ..|....|:|.:.|||.|||.|.|:|.:.|...|.||.......:   |..|
Mouse   136 --------PQFQETPPLVLEVKELEAVTLRCVARGSPQPYVTWKFRGQDLGKGQGQVQ---VQNG 189

  Fly   307 SLQISSAEDIDSGNYQCRASNTVDSLDAQATVQVQEPPKFIKAPKDTTAHEKDEPELKCDIWGKP 371
            :|.|...|...:|:|.|:||::..|:.....:.|..||..:..|.::|.:...:..|.|.....|
Mouse   190 TLWIRRVERGSAGDYTCQASSSEGSITHATQLLVLGPPVIVVPPSNSTVNSSQDVSLACRAEAYP 254

  Fly   372 KPV-IRWLKNGDLITPNDYMQ-----LVDGHNLKILGLLNSDAGMFQCVGTNAAGSVH---AAAR 427
            ..: ..|.::|..:.....:|     |||| :|.:......|||.:.||.:|  |.:|   |:|.
Mouse   255 ANLTYSWFQDGVNVFHISRLQSRVRILVDG-SLWLQATQPDDAGHYTCVPSN--GFLHPPSASAY 316

  Fly   428 LRVV-PQGVKIKKRKSQGHSTKSLQTFDNLTKRRKPFNSGEQ--LR--------------TKSGG 475
            |.|: |..|.:...::                   |..:|.:  :|              ||.|.
Mouse   317 LTVLYPAQVTVMPPET-------------------PLPTGMRGVIRCPVRANPPLLFVTWTKDGQ 362

  Fly   476 SFPFPDEDDDLDDNDSGTTRLRIPSGKLPKFEQPLNDRRFNILNAGSALPLDNQSKSYEDDDDDY 540
            :...    |.......|      |.|.|                   .:.|.|::...|.....|
Mouse   363 ALQL----DKFPGWSLG------PEGSL-------------------IIALGNENALGEYSCTPY 398

  Fly   541 DE-----DDPAKEALLEAYKQGEDAHKILDSWQQSKSKKSQQQKQSPASPDSPEQDPSVPHPGGK 600
            :.     ..|..:.||:|                           .||..|.|:::..       
Mouse   399 NSLGTAGPSPVTQVLLKA---------------------------PPAFIDQPKEEYF------- 429

  Fly   601 PLDSGLQARLPSQPRDLVAQIVKSRFVTLSWVE---PLQNAGDVVYYTVYYKMNNSEREQKMVTK 662
             .:.|.:..:|...|.....||       ||.:   .||....|        .:|:....:.:||
Mouse   430 -QEVGRELLIPCSARGDPPPIV-------SWAKVGRGLQGQAQV--------DSNNSLVLRPLTK 478

  Fly   663 SHDDQQVNIQSLLPGRTYQFRVEANTNFGSGASSAPLEVSTQPEVNIAGPPRNFEGYARSH---- 723
                                  ||...:...||:|...|:|...|.:.|        ...|    
Mouse   479 ----------------------EAQGRWECSASNAVARVTTSTNVYVLG--------TSPHVVTN 513

  Fly   724 -------KEIYVKWEEPTVTNGEILKYRVYYSENDSGAD-LYHDSTAL-------EAVLTELRPH 773
                   |...|.| ||....|.:.::.|:|:......| .:||..:|       ..::..|:.|
Mouse   514 VSVVPLPKGANVSW-EPGFDGGYLQRFSVWYTPLAKRPDRAHHDWVSLAVPIGATHLLVPGLQAH 577

  Fly   774 TDYVISVVPFNRNGMGDSSAEI-----RVKTFSSTPSEPPNNV---------TLEVTSSSSITVH 824
            ..|..||:..|:.|.|..|..:     .:.|..:.|..||..:         .:.|.:...:.:|
Mouse   578 AQYQFSVLAQNKLGSGPFSEIVLSIPEGLPTTPAAPGLPPTEIPPPLSPPRGLVAVRTPRGVLLH 642

  Fly   825 WEPPAEEDRNGQITGYKIRYRKFKDAPQVKSTPANIRYFEL--SNLDRNAEYQVKIAAMTVN-GS 886
            |:||  |...|::.||.:..|:.....::..........:|  ..|.::..|:.::.|...: .|
Mouse   643 WDPP--ELIPGRLDGYILEGRQGSQGWEILDQGVAGTEIQLLVPGLIKDVLYEFRLVAFADSYVS 705

  Fly   887 GPFTEWNRANTLENDLD----ETQVPG---KPIWISI---------------------------- 916
            .|.   |.||...:.|:    .||:||   :|:...:                            
Mouse   706 DPS---NVANISTSGLEVYPSRTQLPGLLPQPVLAGVVGGVCFLGVAVLVSILAACLMNRRRAAR 767

  Fly   917 ----------------------H--PGANN------------------IALHWGPPQHPEIKIRN 939
                                  |  ||:.:                  .:|.||.|..|.....:
Mouse   768 RHRKRLRQDPPLIFSPRGKSGSHSAPGSGSPDSVTKFKLQGSPVPSLRQSLLWGEPARPPSPHPD 832

  Fly   940 YVLGWG--------RG-----------IPDENTIELKETERYHILKNLESNMDYVVS-------- 977
            ..||.|        ||           .|.:..:.|:.:|.....|.|..:.|...|        
Mouse   833 SPLGRGPLPLEPICRGPDGRFVMGPTVAPSQEKLCLERSEPRTSAKRLAQSFDCSSSSPSGVPQP 897

  Fly   978 ----------------------------------LRARNVKGDGPPIYDNIKTRDEEPVDAPTP 1007
                                              .|..||.||.||:        |||..||.|
Mouse   898 LCITDISPVGQPLAAVPSPLPGPGPLLQYLSLPFFREMNVDGDWPPL--------EEPTPAPPP 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fraNP_523716.2 Ig 36..140 CDD:299845 2/5 (40%)
Ig <180..222 CDD:299845 16/61 (26%)
IG_like 257..340 CDD:214653 27/82 (33%)
IGc2 264..327 CDD:197706 23/62 (37%)
I-set 344..430 CDD:254352 25/94 (27%)
Ig 363..428 CDD:299845 21/73 (29%)
FN3 611..703 CDD:238020 18/94 (19%)
FN3 711..799 CDD:238020 23/111 (21%)
FN3 806..897 CDD:238020 20/102 (20%)
FN3 908..989 CDD:238020 28/214 (13%)
FN3 1011..1097 CDD:238020
FN3 1109..1205 CDD:238020
Neogenin_C 1273..1521 CDD:284094
Igsf9NP_001139272.1 IG_like 28..110 CDD:214653 22/96 (23%)
Ig 136..223 CDD:386229 29/89 (33%)
Ig_3 227..305 CDD:372822 19/78 (24%)
Ig 341..404 CDD:386229 13/91 (14%)
Ig 436..500 CDD:319273 19/100 (19%)
FN3 508..599 CDD:238020 22/91 (24%)
FN3 625..715 CDD:238020 19/94 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 767..807 3/39 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..842 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..974 8/20 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1016..1079
PDZ-binding 1177..1179
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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