Sequence 1: | NP_523716.2 | Gene: | fra / 36377 | FlyBaseID: | FBgn0011592 | Length: | 1526 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001920501.5 | Gene: | hmcn2 / 565032 | ZFINID: | ZDB-GENE-030131-9765 | Length: | 4212 | Species: | Danio rerio |
Alignment Length: | 1810 | Identity: | 363/1810 - (20%) |
---|---|---|---|
Similarity: | 580/1810 - (32%) | Gaps: | 640/1810 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 SCLIFQLIGSSLA------SQALSFTLEPQDAVVPEGHSVLLQCAGTASIGRGGKSKSNLPSSVS 77
Fly 78 IRWRGPDGQDLV--IVGDTFRTQLKNGSLYISSV---EENRGLTGAYQCLLTAEGVGSI--LSR- 134
Fly 135 --------------PALVAIVRQPDLNQDFLETYLLPGQTAYFRCMLGEANWQEGVKHSVQWLKD 185
Fly 186 DLPLPLDKL------------RMVVLPNGALEIDEVGPSDRGSYQCNVTSGSSSRLSSKTNLNIK 238
Fly 239 KPSDPGAENSVAPSFLVGPSPKTVREGDTVTLDCVANGVPKPQIKWLRNGMDLDFNDLDSRFSIV 303
Fly 304 GTGSLQISSAEDIDSGNYQCRASNTVDSLDAQATVQVQEPPKFIKAPKD-----TTAHEKDEPEL 363
Fly 364 KCDIWGKPKPVIRWLKNGDLITP-NDYMQLVDGHNLKILGLLNSDAGMFQCVGTNAAGS------ 421
Fly 422 --VHAAARLRVVPQGVKIKKRKS-------QGHSTKSLQTFDNLTKRRKPFNSGEQLRTKSGGSF 477
Fly 478 PFPDEDDDLDDNDSGTTR---------------LRIPSGKLPKFEQPLNDRRFNILNAGSALPLD 527
Fly 528 NQSKSYEDDDDDYDEDDPAK---------EALLEAYKQG----EDAHKILDSWQQSKS------- 572
Fly 573 --KKSQQQKQSPASPDSPEQDPSVPHPG---------GKPLDSGLQA-RLPSQPRDLVAQIVKSR 625
Fly 626 FVTLSWVEP----LQNAGDVVYYTVYYKMNNSEREQKMVTKSHDDQQVNIQSLLPGRTYQFRVEA 686
Fly 687 NTNFGSGASSAPLEVSTQP---------EVNI-AGPPRNFEGYARSHKEIYVKWEEPTVTNGEIL 741
Fly 742 KYRVYYSENDSGADLYHDSTALEAVLTELRPHTDY--------VISVVPFNR--------NGMGD 790
Fly 791 SSAEIRVKTFSSTP----SEPPNNVTL----------EVTSSSSITVHW---------EPPAEED 832
Fly 833 RNGQITGYKIRYRKFKDA-------------------------PQVKSTPANIRYFELSNLDRNA 872
Fly 873 EYQVKIAAMTVNGS-----------GPFTEW---------------------------------- 892
Fly 893 ------NRANTLENDLDET-QVPGKPIWISIHPGANNIAL--HWGPPQHPE-----IKIRNYVLG 943
Fly 944 ------------------W---GRGIPDENTIELKETERYHILK----NLESNMDYVVSLRARNV 983
Fly 984 KGDG----------PPIYDNIKTRDEEPVDAPTPLEVPVGLRAITMSSSSIVVYWIDTMLNKNQH 1038
Fly 1039 VTDNRHYTVSYGITGSNRYRYHNTTDLNCMINDLRPNTQYEFAVKVVKGRRESSWSMSVLNSTYQ 1103
Fly 1104 NVPVTPPREVTVRLDEMNPPTVI----------VQWIPPKHTLGQITGYNIYYTTDTTKRDRDWS 1158
Fly 1159 VEAFAGEETMLMLPNLKPYTTYYFKVQARTTKGANNAPFSALVSYTTSAAVTMQEPDTIAKGIDN 1223
Fly 1224 EKLLYIIIAATAVV--------LLVVLLGVLLLCRRKPQSSPEHTKKSYQKNNVGVPKPPDLW-- 1278
Fly 1279 ------------IHHDQMELKNI---DKGLHTVTPVCSDGASSSGALTLPRSVVHSEYEVETPVP 1328
Fly 1329 GHVTNSLDKRSYVPGYMTTSMNGTMERPQYPRTQYSHQN-RSHMTM---EAGLSQQSLTQPQSNS 1389
Fly 1390 MAQTPEHPYGGYDANFCNAGNAAAGN-GCVSTIESSKRGHPLKSFS--VPGPP-------PTGGA 1444
Fly 1445 TPVTKHTPAVTIRPQNQSPYKKPSFSAATPNRLQGGGSVVHSTDEIQRLAPSTST 1499 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fra | NP_523716.2 | Ig | 36..140 | CDD:299845 | 33/125 (26%) |
Ig | <180..222 | CDD:299845 | 14/53 (26%) | ||
IG_like | 257..340 | CDD:214653 | 29/82 (35%) | ||
IGc2 | 264..327 | CDD:197706 | 26/62 (42%) | ||
I-set | 344..430 | CDD:254352 | 25/99 (25%) | ||
Ig | 363..428 | CDD:299845 | 20/73 (27%) | ||
FN3 | 611..703 | CDD:238020 | 20/95 (21%) | ||
FN3 | 711..799 | CDD:238020 | 18/103 (17%) | ||
FN3 | 806..897 | CDD:238020 | 23/185 (12%) | ||
FN3 | 908..989 | CDD:238020 | 23/122 (19%) | ||
FN3 | 1011..1097 | CDD:238020 | 18/85 (21%) | ||
FN3 | 1109..1205 | CDD:238020 | 22/105 (21%) | ||
Neogenin_C | 1273..1521 | CDD:284094 | 49/258 (19%) | ||
hmcn2 | XP_001920501.5 | VWA_2 | 38..208 | CDD:290253 | |
IG | 441..512 | CDD:214652 | |||
Ig | 441..502 | CDD:299845 | |||
I-set | 516..603 | CDD:254352 | |||
Ig | 533..600 | CDD:143165 | |||
IG | 613..691 | CDD:214652 | |||
Ig | 624..690 | CDD:143165 | |||
IG | 710..784 | CDD:214652 | 5/17 (29%) | ||
Ig | 714..781 | CDD:143165 | 5/14 (36%) | ||
IG | 794..879 | CDD:214652 | 31/102 (30%) | ||
Ig | 794..879 | CDD:299845 | 31/102 (30%) | ||
I-set | 885..972 | CDD:254352 | 23/130 (18%) | ||
Ig | 904..972 | CDD:299845 | 18/102 (18%) | ||
IG_like | 982..1063 | CDD:214653 | 29/82 (35%) | ||
IGc2 | 989..1053 | CDD:197706 | 26/65 (40%) | ||
IG_like | 1083..1159 | CDD:214653 | 20/75 (27%) | ||
Ig | 1089..1156 | CDD:143165 | 18/66 (27%) | ||
I-set | 1163..1241 | CDD:254352 | 15/93 (16%) | ||
IGc2 | 1176..1231 | CDD:197706 | 11/70 (16%) | ||
Ig | 1244..1327 | CDD:299845 | 16/97 (16%) | ||
IG_like | 1258..1335 | CDD:214653 | 12/89 (13%) | ||
Ig | 1338..1430 | CDD:299845 | 27/128 (21%) | ||
I-set | 1344..1428 | CDD:254352 | 23/117 (20%) | ||
IG_like | 1441..1523 | CDD:214653 | 22/111 (20%) | ||
IGc2 | 1448..1513 | CDD:197706 | 16/93 (17%) | ||
IG_like | 1536..1616 | CDD:214653 | 11/81 (14%) | ||
IGc2 | 1545..1606 | CDD:197706 | 9/62 (15%) | ||
IG_like | 1638..1714 | CDD:214653 | 10/80 (13%) | ||
Ig | 1644..1711 | CDD:143165 | 6/66 (9%) | ||
IG_like | 1753..1830 | CDD:214653 | 15/80 (19%) | ||
Ig | 1760..1822 | CDD:143165 | 13/65 (20%) | ||
I-set | 1834..1918 | CDD:254352 | 21/100 (21%) | ||
Ig | 1851..1925 | CDD:299845 | 18/88 (20%) | ||
IG_like | 1937..2017 | CDD:214653 | 22/121 (18%) | ||
IGc2 | 1943..2007 | CDD:197706 | 16/102 (16%) | ||
IG_like | 2031..2110 | CDD:214653 | 18/119 (15%) | ||
IGc2 | 2039..2100 | CDD:197706 | 15/101 (15%) | ||
I-set | 2114..2202 | CDD:254352 | 17/98 (17%) | ||
IGc2 | 2129..2192 | CDD:197706 | 10/62 (16%) | ||
IG | 2214..2295 | CDD:214652 | 16/60 (27%) | ||
IGc2 | 2222..2287 | CDD:197706 | 13/52 (25%) | ||
I-set | 2307..2391 | CDD:254352 | |||
IGc2 | 2321..2381 | CDD:197706 | |||
I-set | 2400..2484 | CDD:254352 | |||
IGc2 | 2410..2474 | CDD:197706 | |||
IG_like | 2496..2576 | CDD:214653 | |||
IGc2 | 2507..2566 | CDD:197706 | |||
IG | 2589..2669 | CDD:214652 | |||
IGc2 | 2597..2659 | CDD:197706 | |||
IG | 2679..2760 | CDD:214652 | |||
IGc2 | 2687..2750 | CDD:197706 | |||
I-set | 2764..2851 | CDD:254352 | |||
Ig | 2770..2845 | CDD:299845 | |||
IG | 2863..2943 | CDD:214652 | |||
Ig | 2873..2942 | CDD:299845 | |||
IG_like | 2954..3032 | CDD:214653 | |||
IGc2 | 2963..3023 | CDD:197706 | |||
IG_like | 3046..3122 | CDD:214653 | |||
IGc2 | 3051..3113 | CDD:197706 | |||
IG_like | 3133..3214 | CDD:214653 | |||
Ig | 3144..3213 | CDD:299845 | |||
IG | 3224..3303 | CDD:214652 | |||
IGc2 | 3232..3293 | CDD:197706 | |||
IG_like | 3316..3394 | CDD:214653 | |||
IGc2 | 3321..3384 | CDD:197706 | |||
TSP1 | 3401..3452 | CDD:214559 | |||
G2F | 3455..3636 | CDD:284812 | |||
EGF_CA | 3691..3721 | CDD:214542 | |||
Furin-like | 3728..3857 | CDD:279142 | |||
EGF_CA | 3731..3774 | CDD:284955 | |||
EGF_CA | 3776..3814 | CDD:214542 | |||
EGF_CA | 3816..3849 | CDD:238011 | |||
EGF_CA | 3858..3899 | CDD:284955 | |||
EGF_CA | 3901..3940 | CDD:214542 | |||
EGF_CA | 4005..4044 | CDD:214542 | |||
EGF_CA | 4045..4085 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |