DRSC/TRiP Functional Genomics Resources

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Protein Alignment fra and Nphs1

DIOPT Version :9

Sequence 1:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster
Sequence 2:NP_062332.2 Gene:Nphs1 / 54631 MGIID:1859637 Length:1256 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fraNP_523716.2 Ig 36..140 CDD:299845
Ig <180..222 CDD:299845
IG_like 257..340 CDD:214653
IGc2 264..327 CDD:197706
I-set 344..430 CDD:254352
Ig 363..428 CDD:299845
FN3 611..703 CDD:238020
FN3 711..799 CDD:238020
FN3 806..897 CDD:238020
FN3 908..989 CDD:238020
FN3 1011..1097 CDD:238020
FN3 1109..1205 CDD:238020
Neogenin_C 1273..1521 CDD:284094
Nphs1NP_062332.2 Ig 52..128 CDD:299845
IG_like 52..127 CDD:214653
C2-set_2 155..242 CDD:285423
Ig 254..332 CDD:299845
IG_like 268..350 CDD:214653
C2-set_2 358..440 CDD:285423
Ig 459..544 CDD:299845
I-set 460..555 CDD:254352
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..516
Ig 563..646 CDD:299845
IG_like 670..750 CDD:214653
Ig 676..750 CDD:299845
Ig_3 753..834 CDD:290638
IG_like 762..848 CDD:214653
Ig 848..956 CDD:299845
IG_like 859..949 CDD:214653
fn3 956..1039 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1048..1071
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1112..1143
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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