DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fra and SDK2

DIOPT Version :9

Sequence 1:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster
Sequence 2:NP_001138424.1 Gene:SDK2 / 54549 HGNCID:19308 Length:2172 Species:Homo sapiens


Alignment Length:1729 Identity:369/1729 - (21%)
Similarity:620/1729 - (35%) Gaps:487/1729 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LWNWLLSSCLIFQLIGSSLASQALS--FTLEP-QDAVVPEGHSVLLQCAGTASIGRGGKSKSNLP 73
            :|..|:.:.|....|.::.|...:|  |..|| :..|..||:.::|.|....|            
Human     1 MWGLLIWTLLALHQIRAARAQDDVSPYFKTEPVRTQVHLEGNRLVLTCMAEGS------------ 53

  Fly    74 SSVSIRWRGPDGQDLVIVGDTFRTQLKNGSLYISSVEENRGLTGAYQCLLTAEGVGSILSRPALV 138
            ..:..:|. .:.::|......:|       ..|:|::  |...|.|:|:: ...:|::|.|...|
Human    54 WPLEFKWL-HNNRELTKFSLEYR-------YMITSLD--RTHAGFYRCIV-RNRMGALLQRQTEV 107

  Fly   139 AIVRQPDLNQDFLETYLLPGQTAYFRCMLGEANWQEGVKH----------------------SVQ 181
                                |.||.      .:::||.||                      .|.
Human   108 --------------------QVAYM------GSFEEGEKHQSVSHGEAAVIRAPRIASFPQPQVT 146

  Fly   182 WLKDDLPLPLDKLRMVVLPNGALEIDEVGPSDRGSYQCNVTS-----GSSSRLSSKTNLNIKKPS 241
            |.:|...:|......:.|.|..:.:..|.| |.|.|.....:     ..:|:..:.|..|:..|:
Human   147 WFRDGRKIPPSSRIAITLENTLVILSTVAP-DAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPA 210

  Fly   242 DPGAENSVAPSFLVGPSPKTVREGDT-VTLDCVANGVP--KPQIKWLRNGMDLD--FNDLDSRFS 301
            ||     :||:.::.|...:|..|.: |||:||||..|  |..|.|.::|:.|.  .:|.:.|.:
Human   211 DP-----IAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLLSGGISDHNRRLT 270

  Fly   302 IVG-TGSLQISSAEDIDSGNYQCRA---SNTVDSLDAQATVQVQEPPKFIKAP-KDTTAHEKDEP 361
            |.. |||         |:|.|:|.|   |::|.|:...|.:.|.|||:|:|.| :..||..:...
Human   271 IPNPTGS---------DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVV 326

  Fly   362 ELKCDIWGKPKPVIRWLKNGDLITPND---YMQLVDGHNLKILGLLNSDAGMFQCVGTNAAGSVH 423
            ::.|...|.|.|.|.|.|:..::....   :.|..|| .|:|.||:..|.|||||...||||.|.
Human   327 DIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDG-GLQISGLVPDDTGMFQCFARNAAGEVQ 390

  Fly   424 AAARLRVVPQGVKIKKRKSQGHSTKSLQTFDNLTKRRKPFNS------GEQLRTKSGGSFPFPDE 482
            .:..|.|.                   ....|:|  |.|.:|      ...|..::.|: |.|  
Human   391 TSTYLAVT-------------------SIAPNIT--RGPLDSTVIDGMSVVLACETSGA-PRP-- 431

  Fly   483 DDDLDDNDSGTTRLRIPSGKLPKFEQPLNDRRFNILNAGSALPLDNQSKSYEDDDDDYDEDDPAK 547
               ......|...|...|.:||         ||..|.:||.|    .|.::..|...|       
Human   432 ---AITWQKGERILASGSVQLP---------RFTPLESGSLL----ISPTHISDAGTY------- 473

  Fly   548 EALLEAYKQG-EDAHKILDSWQQSKSKKSQQQ----KQSPAS-PDSPEQDPSV------------ 594
             ..|....:| ::|...|..|.:::..|..|.    |.:.|| ......||.|            
Human   474 -TCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGAT 537

  Fly   595 ----PHP------------------------------GGKPLDSG-LQAR-LPSQPRDLVAQI-- 621
                .||                              ||....|. |:.| ||..|...||.:  
Human   538 LGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLST 602

  Fly   622 VKSRFVTLSWVEPLQNAGDVVYYTVYYKMNNSEREQKMVTKSHDDQQVNIQSLLPGRTYQFRVEA 686
            |:.|.:.|:|.:|......::.|.:....||:.....:.:.......|.::.|:|.|:||||:.|
Human   603 VERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCA 667

  Fly   687 NTNFGSGASSAPLEVSTQPEVNIAGPPRNFEGYARSHKEIYVKWEEPT------VTNGEILKYRV 745
            ..:.|.|..|...|..:.||.....||:|.....|:::.|.::|:.|.      :..|.|::|.:
Human   668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCL 732

  Fly   746 ------YYSENDSGADLYHDSTALEAVLTELRPHTDYVISVVPFNRNGMGDSSAEIRVKTFSSTP 804
                  |..:|.:.||:.:      .:|.:|...|:|.|.|..:|..|:|..|:::...|....|
Human   733 AGLPVGYQFKNITDADVNN------LLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVP 791

  Fly   805 SEPPNNVTLEVTSSSSI--------------------TVHWEPPAEE------------------ 831
            :.||.||..|.|:|::|                    .:.|||..||                  
Human   792 TVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVG 856

  Fly   832 ---------------------------------------------------------------DR 833
                                                                           ::
Human   857 FVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEK 921

  Fly   834 NGQITGYKIRYRKF-KDAPQVKSTPANIRY-FELSNLDRNAEYQVKIAAMTVNGSGPFTEWNRAN 896
            ||.:|||:|.:.:: :...:|.....|:.. :.::.|.....|.:::||||..|.|..:    |:
Human   922 NGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS----AS 982

  Fly   897 TLENDLDETQVPGKPIWISI-HPGANNIALHWGPPQHPEIKIRNYVLGWGRGIPDENTIELKETE 960
            |:.:.: ..::||.|..:.| :.|..::.|.:.|....:..|..:::....|:       :.|.|
Human   983 TISSGV-PPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGV-------VGEGE 1039

  Fly   961 RYHILKNLESNMD--------------YVVSLRARNVKGDGPPIYDNIKTRDEEPVDAPTPLEVP 1011
            .:.::..|.:..|              |...:|..|:.|..||   :..:|..:.:.|| |...|
Human  1040 EWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPP---SQPSRKIQTLQAP-PDMAP 1100

  Fly  1012 VGLRAITMSSSSIVVYWI---DTMLNKNQHVTDNRHYTVSYGIT-GSNRYRYH---NTTDLNCMI 1069
            ..:...|.|.:|:.:.|:   :...|.|   .::..|.:.|..: |..:...|   :..:.:..|
Human  1101 ANVSLRTASETSLWLRWMPLPEMEYNGN---PESVGYKIKYSRSDGHGKTLSHVVQDRVERDYTI 1162

  Fly  1070 NDLRPNTQYEFAVKVVKGRRESSWSMSVLNSTYQNVPVTPPREVTVRLDEMNPPTVIVQW--IPP 1132
            .||...|:|...|:.........||.:|:..|.::||.:.|..|:......:  :::|:|  :|.
Human  1163 EDLEEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSS--SMLVRWSEVPE 1225

  Fly  1133 KHTLGQITGYNIYY-TTDTTKRDRDWSVEAFAGEETMLMLPNLKPYTTYYFKVQARTTKGANNAP 1196
            ....|.:.||.:.| ..|:..:.|.|.||..:....  .|..|..|..|..:|.|.|..| :.:|
Human  1226 ADRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSA--QLTGLGKYVLYEVQVLAFTRIG-DGSP 1287

  Fly  1197 FSALVSYTTSAAVTMQEPDTIAKGIDNEK-----LLYIIIAATAVVLLVVLLGVLLLCRRKPQSS 1256
                           ..|..:.:.:|:..     :|:..:..|:|.|:           .:|.::
Human  1288 ---------------SHPPILERTLDDVPGPPMGILFPEVRTTSVRLI-----------WQPPAA 1326

  Fly  1257 PEHTKKSYQKNNVGVPKPPDLWIHHDQMELKNIDKGLHTVTPVCSDGASSSGALTLPRSVVHSEY 1321
            |.....:||             |.|   .|........||..:.......:.....|.||.....
Human  1327 PNGIILAYQ-------------ITH---RLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRI 1375

  Fly  1322 EVETPVP-GHVTNSLDKRSYVPGYMTTSMNGTMERPQYPRTQYSHQNRSHMTMEAGLSQQSLT-- 1383
            ..:|... |....:|        .:||...   :|||.|...        |..:..:..:|:.  
Human  1376 TAQTRKGWGEAAEAL--------VVTTEKR---DRPQPPSRP--------MVQQEDVRARSVLLS 1421

  Fly  1384 -QPQSNSMA-------QTPEHPYGGYDANFCNAGNAAA------------------GNGCVSTIE 1422
             :|.|:.::       ||.|.|.|.:..:..:..:.|:                  ....:...|
Human  1422 WEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGDSE 1486

  Fly  1423 SSKRGHPLKSF-SVPGPPPTGGATPVTKH-TPAVTIRPQ 1459
            .|:....|.:. :.|...||  ...||.| |.:|.||.|
Human  1487 FSEESESLTTLQAAPDEAPT--ILSVTPHTTTSVLIRWQ 1523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fraNP_523716.2 Ig 36..140 CDD:299845 23/106 (22%)
Ig <180..222 CDD:299845 11/41 (27%)
IG_like 257..340 CDD:214653 31/91 (34%)
IGc2 264..327 CDD:197706 25/71 (35%)
I-set 344..430 CDD:254352 32/89 (36%)
Ig 363..428 CDD:299845 25/67 (37%)
FN3 611..703 CDD:238020 25/93 (27%)
FN3 711..799 CDD:238020 24/99 (24%)
FN3 806..897 CDD:238020 30/193 (16%)
FN3 908..989 CDD:238020 17/95 (18%)
FN3 1011..1097 CDD:238020 19/92 (21%)
FN3 1109..1205 CDD:238020 23/98 (23%)
Neogenin_C 1273..1521 CDD:284094 41/218 (19%)
SDK2NP_001138424.1 Ig 27..109 CDD:299845 22/124 (18%)
IG_like 40..109 CDD:214653 18/111 (16%)
I-set 120..203 CDD:254352 14/83 (17%)
Ig 132..210 CDD:299845 14/78 (18%)
IG_like 222..304 CDD:214653 30/90 (33%)
IGc2 233..286 CDD:197706 23/61 (38%)
I-set 308..397 CDD:254352 32/89 (36%)
Ig 326..394 CDD:143165 25/68 (37%)
I-set 402..492 CDD:254352 27/118 (23%)
Ig 416..492 CDD:299845 22/102 (22%)
Ig 502..586 CDD:299845 13/83 (16%)
IG_like 502..586 CDD:214653 13/83 (16%)
FN3 590..681 CDD:238020 24/90 (27%)
FN3 693..786 CDD:238020 24/98 (24%)
FN3 794..890 CDD:238020 13/95 (14%)
FN3 895..983 CDD:238020 17/91 (19%)
FN3 993..1087 CDD:238020 19/103 (18%)
FN3 1099..1194 CDD:238020 20/97 (21%)
FN3 1201..1290 CDD:238020 23/108 (21%)
FN3 1301..1394 CDD:238020 19/127 (15%)
FN3 1400..1484 CDD:238020 13/91 (14%)
FN3 1503..1616 CDD:238020 10/23 (43%)
FN3 1626..1719 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1729
FN3 1724..1805 CDD:238020
FN3 1837..1916 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2172
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2166..2172
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4221
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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