Sequence 1: | NP_523716.2 | Gene: | fra / 36377 | FlyBaseID: | FBgn0011592 | Length: | 1526 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038937673.1 | Gene: | Igdcc4 / 363081 | RGDID: | 1310919 | Length: | 1345 | Species: | Rattus norvegicus |
Alignment Length: | 1581 | Identity: | 351/1581 - (22%) |
---|---|---|---|
Similarity: | 550/1581 - (34%) | Gaps: | 514/1581 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 LSFTLEPQDAVVPEGHSVLLQCA-GTASIGRGGKSKSNLPSSVSIRWRGPDGQDLVIVGDTFRTQ 98
Fly 99 LKNGSLYISSVEEN------------RGLTGAYQCLLTAEG-VGSILSRPALVAIVRQPDLNQDF 150
Fly 151 LETYLLPGQTAYFRCMLGEANWQEGVKHS-VQWLKDDLPLPLDKLRMVVLPNGALEIDEVGPSDR 214
Fly 215 GSYQCNVTSGSSSRLSSKTNLNIKKPSDPGAENSVAPSFLVGPSPKTVREGDTVTLDCVANGVPK 279
Fly 280 PQIKWLRNGMDLDFNDLDSRFSIVGTGSLQISSAEDIDSGNYQCRAS--NTVDSLDAQATVQVQE 342
Fly 343 PPKFIKAPKDTTAHEKDEPELKCDIWGKPKPVIRWLKNGDLITPNDYMQLVDGHNLKI---LGLL 404
Fly 405 NSDAGMFQCVGTNAAGSVHAAARLRVVPQGVKIKKRKSQGHSTKSLQTFDNLTKRRKPFNSGEQL 469
Fly 470 RTKSGGSFPFPDEDDDLDDNDSGTTRLRIPSGKLPKFEQPLNDRRFNILNAGSALPLDNQSKSYE 534
Fly 535 DDDDDYDEDDPAKEALLEAYKQGEDAHKILDSWQQSKSKKSQQQKQSPASPDSPEQDPSVPHPGG 599
Fly 600 KPLDSGLQARLPSQPRDLVAQIVKSRFVTLSWVEPLQNAGDVVYYTVYYK----MNNSEREQKMV 660
Fly 661 TKSHDDQQVNIQSLLPGRTYQFRVEANTNFGSGASSAPLEVSTQPEVNIAGPPRNFEGYARSHKE 725
Fly 726 IYVKWEEPTVTNGEILKYRVYYSENDSGADLYHDSTALEAVLTELRPHTDYVISVVPFNRNGMGD 790
Fly 791 SSAEIRVKTFSSTPSEPPNNVTLEVTSSSSITVHWEPPAEEDRNGQITGYKIRYRKFKDAPQVKS 855
Fly 856 T--PANIRYFELSNLDRNAEYQVKIAAMTVNGSGPFTEWNRANTLENDLDETQVPGKPIWISIHP 918
Fly 919 GANNIALHWGPPQHPEIKIRNYVLGW----------------GRGIP--DENTIELKETERYHIL 965
Fly 966 KNLESNMDYVVSLRARNVKGDGPPIYDNI-KTRDEEPVDAPTP-LEV-------PVGLRAITMSS 1021
Fly 1022 SSIVVYWIDTMLNKNQHVTDNR--HYTVSY---GITGSNRYRYHNTTDLNCMINDLRPNTQYEFA 1081
Fly 1082 VKVVKGRRESSWSMSVLNSTYQNVPVTPPREVTVRLDEMNPPTVIVQWIPPKHTLGQITGYNIYY 1146
Fly 1147 TTDTTKRDRDWSVEAFAGEETMLMLPNLKPYTTYYFKVQARTTKGANNAPFSALVSYTTSAAVTM 1211
Fly 1212 QEPDTIAKGIDNEKLLYIIIAATAVVLLVVLLGVLLL----C---RRK------PQSSPEHTKKS 1263
Fly 1264 ---YQKNNVGVPKPPDLWIHHDQMELKNIDKGLHTVTPVCSDGASSSGALTLPRSVVHSEYEVET 1325
Fly 1326 PVPGHVTNSLDKRSYVPGYMTTSMNGTMERPQYPRTQYSHQNRSHMTMEAG------------LS 1378
Fly 1379 QQSLTQPQSNSMAQTPEHPYGG----------YDANFCNAGNAAAGNGCVSTIE---------SS 1424
Fly 1425 KRG---------HPLKSFSVPGPPPTGGATPVTKHTPAVTIRPQNQSPYKKPSFSAATPNRLQGG 1480
Fly 1481 GSVVHSTDEIQRLAPSTSTEE 1501 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fra | NP_523716.2 | Ig | 36..140 | CDD:299845 | 36/117 (31%) |
Ig | <180..222 | CDD:299845 | 17/41 (41%) | ||
IG_like | 257..340 | CDD:214653 | 29/84 (35%) | ||
IGc2 | 264..327 | CDD:197706 | 22/64 (34%) | ||
I-set | 344..430 | CDD:254352 | 27/88 (31%) | ||
Ig | 363..428 | CDD:299845 | 23/67 (34%) | ||
FN3 | 611..703 | CDD:238020 | 15/95 (16%) | ||
FN3 | 711..799 | CDD:238020 | 13/87 (15%) | ||
FN3 | 806..897 | CDD:238020 | 32/92 (35%) | ||
FN3 | 908..989 | CDD:238020 | 26/98 (27%) | ||
FN3 | 1011..1097 | CDD:238020 | 23/90 (26%) | ||
FN3 | 1109..1205 | CDD:238020 | 31/95 (33%) | ||
Neogenin_C | 1273..1521 | CDD:284094 | 45/269 (17%) | ||
Igdcc4 | XP_038937673.1 | Ig | 131..223 | CDD:416386 | 34/110 (31%) |
Ig strand A' | 135..138 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 144..154 | CDD:409353 | 5/16 (31%) | ||
Ig strand C | 160..165 | CDD:409353 | 2/7 (29%) | ||
Ig strand C' | 167..169 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 175..179 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 182..187 | CDD:409353 | 3/4 (75%) | ||
Ig strand F | 209..217 | CDD:409353 | 5/9 (56%) | ||
Ig_3 | 237..308 | CDD:404760 | 23/77 (30%) | ||
Ig strand A' | 243..246 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 252..259 | CDD:409353 | 3/12 (25%) | ||
Ig strand C | 265..270 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 272..274 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 280..284 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 287..292 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 300..308 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 316..324 | CDD:409353 | 1/7 (14%) | ||
IG_like | 342..423 | CDD:214653 | 29/84 (35%) | ||
Ig strand A' | 342..347 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 353..360 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 366..371 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 373..375 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 381..384 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 387..393 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 400..407 | CDD:409353 | 4/6 (67%) | ||
Ig | 442..514 | CDD:416386 | 24/73 (33%) | ||
Ig strand B | 443..451 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 457..462 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 464..467 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 472..476 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 478..485 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 494..501 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 505..514 | CDD:409353 | 4/8 (50%) | ||
fn3 | 522..607 | CDD:394996 | 25/183 (14%) | ||
FN3 | 619..712 | CDD:238020 | 34/94 (36%) | ||
fn3 | 724..818 | CDD:394996 | 23/94 (24%) | ||
FN3 | 842..934 | CDD:238020 | 24/97 (25%) | ||
FN3 | 942..1034 | CDD:238020 | 31/100 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR44170 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |