DRSC/TRiP Functional Genomics Resources

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Protein Alignment fra and AgaP_AGAP002707

DIOPT Version :9

Sequence 1:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster
Sequence 2:XP_312221.5 Gene:AgaP_AGAP002707 / 1273261 VectorBaseID:AGAP002707 Length:499 Species:Anopheles gambiae


Alignment Length:468 Identity:92/468 - (19%)
Similarity:150/468 - (32%) Gaps:163/468 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SSRTLWNWLLSSCLIFQL---------IGSSLASQALSFTLEPQDAVVPEGHSVLLQCAGTASIG 63
            :|...|:.:.||.....:         :.|||...|.|...:...||.                 
Mosquito    50 TSAAFWSEMSSSSATLPVTPLHMAAVPLPSSLTVSAESLIRDVTSAVT----------------- 97

  Fly    64 RGGKSKSNLPSSVSIRWRGPDGQDLVIVGDTFRTQLKNGSLY------ISSVEENRGLTGAYQCL 122
              ..|..:||.:|::....|..........:......:|:|.      .:|.....|.:.||...
Mosquito    98 --DASTHSLPEAVAMHGADPGPMVTTHTAPSSARASPSGTLLGGVSSDSASTAAQYGGSNAYNKY 160

  Fly   123 LTAEGVGSILSRPALVAIVRQPDLNQDFLETYLLPGQTAYFRCMLGEANW----QEGVK------ 177
            .|        .||.|:..:  ||:.:..: .:.:|.|:.:..    |.:|    :|.|.      
Mosquito   161 TT--------FRPLLIPTL--PDVRRSRI-VHSMPYQSKHHH----ERHWGPFFEEPVNVTSGAA 210

  Fly   178 ----------------------HSVQWLK---DDLPL-----------PLDKLRMVVLPNGALEI 206
                                  .:|.|::   |.:.|           |..|::.....|..|.|
Mosquito   211 LQVGYHLSTEAILNCRVGMLKDKTVMWIRRTTDKVSLLTVGNNTYSGDPRIKVKFQYPNNWRLHI 275

  Fly   207 DEVGPSDRGSYQCNVTSGSSSRLSSKTNLNIKKPS-----DPGAENS---------------VAP 251
            :.:...|.|.|.|.|::......:  |||.:.:|:     :.|.|.|               |:.
Mosquito   276 NPIKSDDAGLYMCQVSTHPPRVFA--TNLTVLEPAVRIVDEMGYEFSDRYYKLGSTIEISCQVST 338

  Fly   252 SFL--VGPSPK----------------------TVREGDTVTLD--CVANGVPKPQIKWLRNGMD 290
            |:|  :.||||                      |.:.|...|.|  .:::...:..|.|.::|.:
Mosquito   339 SYLATLPPSPKSAGQQQRSKTSPVGASANALDETAKTGSKATKDDNKLSDSTERGLISWTKDGAE 403

  Fly   291 LDFNDLDSRFSIVGT-----GSLQISSAEDIDSGNYQCRASNTVDSLDAQATVQVQ----EPPKF 346
            |   ..|.:.|..||     ..|.|..|..:.:|.|.|    ||....:|| .|||    |.|  
Mosquito   404 L---PKDVKMSFSGTKQWLISRLSILQANRVHNGVYNC----TVAGKQSQA-AQVQVLNGETP-- 458

  Fly   347 IKAPKDTTAHEKD 359
             .|.:....|.|:
Mosquito   459 -AAVQHNFGHRKE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fraNP_523716.2 Ig 36..140 CDD:299845 18/109 (17%)
Ig <180..222 CDD:299845 13/55 (24%)
IG_like 257..340 CDD:214653 26/111 (23%)
IGc2 264..327 CDD:197706 17/69 (25%)
I-set 344..430 CDD:254352 4/16 (25%)
Ig 363..428 CDD:299845
FN3 611..703 CDD:238020
FN3 711..799 CDD:238020
FN3 806..897 CDD:238020
FN3 908..989 CDD:238020
FN3 1011..1097 CDD:238020
FN3 1109..1205 CDD:238020
Neogenin_C 1273..1521 CDD:284094
AgaP_AGAP002707XP_312221.5 IG_like 221..304 CDD:214653 17/84 (20%)
Ig <237..305 CDD:299845 16/69 (23%)
Ig <395..443 CDD:299845 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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