DRSC/TRiP Functional Genomics Resources

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Protein Alignment fra and AgaP_AGAP010422

DIOPT Version :9

Sequence 1:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster
Sequence 2:XP_311526.4 Gene:AgaP_AGAP010422 / 1272626 VectorBaseID:AGAP010422 Length:427 Species:Anopheles gambiae


Alignment Length:438 Identity:100/438 - (22%)
Similarity:168/438 - (38%) Gaps:92/438 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PDLNQDFLET------YLLPGQ--------TAYFRCMLGEANWQEGVKHSVQWLKDDLPLPLDKL 194
            ||.|  |||.      :|..||        |....|.:.|.  :...::.:.|.:|...|....:
Mosquito    18 PDSN--FLEEDRYSPGFLTLGQKYSIAIGSTVVLPCKINET--ENSSQYVLAWKRDIAVLTAGNV 78

  Fly   195 RMVVL-------------PNGA------LEIDEVGPSDRGSYQCNVTSGSSSRLSSKTNLNIKKP 240
            ::.|.             |:|:      |||.:|..||.|.|.|.:.|.....:.....:.:...
Mosquito    79 KVTVNPRIRLMPVQAHTDPHGSLSTGYNLEIRDVRNSDAGDYICQIGSMEPKEIVHTLEILVPPK 143

  Fly   241 SDPGAENSVAPSFLVGPSPK-TVREGDTVTLDCVANGVPKPQIKWLRNGMDLDFNDLDSRFSIVG 304
            .|           .:.||.| .:.:|..:.::|.|:|.|.|:|.|.|.      |::........
Mosquito   144 ID-----------YISPSNKMDIHKGAPIRMECRASGNPTPKIVWSRK------NNMMPNGEANK 191

  Fly   305 TGS-LQISSAEDIDSGNYQCRASNTVDSLDA-QATVQVQEPPKF-IKAPKDTTAHE--KDEPELK 364
            ||: |.|..|....||:|:|.|.|.|...|. :..|.|..||:. ::.|   |.|.  ..|.:|.
Mosquito   192 TGNVLDILHANRHSSGHYKCTADNRVGQPDTREVFVNVLYPPEIEVEQP---TVHSGIGHEAQLV 253

  Fly   365 CDIWGKPKPVIRWLKN-GDLITPNDYMQLVDG--HNLKILGLLNSDAGMFQCVGTNAAGSVHAAA 426
            |.:.|:|.|.:.|.:: ..|.....:.|...|  ::|.|..:..||.|.:.|..:||.|......
Mosquito   254 CIVHGEPTPSVVWYQDTTQLGITEQFSQQNRGNKYSLVIRNVTYSDIGNYTCQASNALGKDRGTL 318

  Fly   427 RLRVVP-----QGVKIKKRKSQGHSTKSLQTFDNLTKRRKPFNSGEQLRTKSGGSFPFPDEDDDL 486
            .|..:|     ....:...:.|.:.:.::|::..:.:.|..|    :|.:|   |......::.|
Mosquito   319 SLSGLPTLCYFDAPTLSSYRDQYNISWTVQSYSPIREYRLFF----RLASK---SMHLLHHENPL 376

  Fly   487 DD---NDSGTTRLRI-----------PSGKLPKFEQPLNDRRFNILNA 520
            |:   :|...|...:           |:.......|..||..:|.|::
Mosquito   377 DNHIYSDRPATNSHLYSSPFSGSNLKPASNYEARVQARNDHGWNKLSS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fraNP_523716.2 Ig 36..140 CDD:299845
Ig <180..222 CDD:299845 15/60 (25%)
IG_like 257..340 CDD:214653 27/85 (32%)
IGc2 264..327 CDD:197706 20/63 (32%)
I-set 344..430 CDD:254352 24/91 (26%)
Ig 363..428 CDD:299845 18/67 (27%)
FN3 611..703 CDD:238020
FN3 711..799 CDD:238020
FN3 806..897 CDD:238020
FN3 908..989 CDD:238020
FN3 1011..1097 CDD:238020
FN3 1109..1205 CDD:238020
Neogenin_C 1273..1521 CDD:284094
AgaP_AGAP010422XP_311526.4 Ig 37..127 CDD:299845 19/91 (21%)
IG_like 37..123 CDD:214653 18/87 (21%)
I-set 142..229 CDD:254352 28/103 (27%)
IGc2 158..218 CDD:197706 21/65 (32%)
IG_like 232..321 CDD:214653 24/91 (26%)
IGc2 246..312 CDD:197706 18/65 (28%)
fn3 339..423 CDD:278470 16/90 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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