Sequence 1: | NP_523716.2 | Gene: | fra / 36377 | FlyBaseID: | FBgn0011592 | Length: | 1526 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476459.1 | Gene: | Cntn1 / 117258 | RGDID: | 621300 | Length: | 1021 | Species: | Rattus norvegicus |
Alignment Length: | 1178 | Identity: | 271/1178 - (23%) |
---|---|---|---|
Similarity: | 447/1178 - (37%) | Gaps: | 340/1178 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 LSSCL----IFQLIGSSLASQALSF----------TLEPQDAVVPEGHSVLLQCAGTASIGRGGK 67
Fly 68 SKSNLPSSVSIRWRGPDGQDLVIVGDTFRTQLKNGSLYISSVEENRGLTGAYQCLLTAEGVGSIL 132
Fly 133 SRPALVAI-VRQPDLNQDFLETYLLPGQTAYFRCMLGEANWQEGVKH-----SVQWLKDDLP--L 189
Fly 190 PLDKLRMVVLPNGALEIDEVGPSDRGSYQCNVTSGSSSRLSSKTNLNIKKPSDPGAENSVAPSFL 254
Fly 255 VGPSPKTVR-------EGDTVTLDCVANGVPKPQIKWLRNGMDLDFNDLDSRFSIVGTGS-LQIS 311
Fly 312 SAEDIDSGNYQCRASNTVDSLDAQATVQVQEPPKFIKAPKDTTAHEKDEPELKCDIWGKPKPVIR 376
Fly 377 WLKNGDLITPNDYMQLVDGHNLKILGLLNSDAGMFQCVGTNAAGSVHAAARLRVV---------P 432
Fly 433 QGVKIKKRK--------------------SQG-----HSTK-------SLQTFDNLTK------- 458
Fly 459 ------RRK------------------PFNS----GEQLRTKSGGSFPFPDEDDDLDDNDSGTTR 495
Fly 496 LRIPSGKLPKFEQPLND----RRFNILNAGSALPLDNQSKSYEDDDDDYDEDDPAKEALLEAYKQ 556
Fly 557 GEDAHKILDSWQQSKSKKSQQQKQSPASPDSPEQDPSVPHPGGKPLDSGLQARLPSQPRDLVAQI 621
Fly 622 VKSRFVTLSWVEPLQNAGDVVYYTVYYK--MNNSEREQKMVTKSHDDQQV---NIQS-----LLP 676
Fly 677 GRTYQFRVEANTNFGSGASSAPLEVSTQPEVNIAGP---PRNFEGYARSHKEIYVKW----EEPT 734
Fly 735 VTN--GEILKYRVYYSEN---------DSGADLYHDSTALEAVLTELRPHTDYVISVVPFNRNGM 788
Fly 789 GDSSAEIRVKTFSSTPSEPPNNVTLEVTSSSSITVHWEPPAEEDRNGQITGYKIRYRKFKDAP-- 851
Fly 852 ----QVKSTPANIRYFELSNLDRNAEYQVKIAAMTVNGSGPFTEWNRANTLENDLDETQVPGKPI 912
Fly 913 WISIHPGANNIALHWGPPQHPEI--KIRN---YVLGWGR--GIPDENTI---------------E 955
Fly 956 LKETERYHILKNLESNMDYVVSLRARNVKGDGPPIYDNIKTRDEEPVDAPTPLEVPVGLRAITMS 1020
Fly 1021 SSSIVVYW 1028 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fra | NP_523716.2 | Ig | 36..140 | CDD:299845 | 28/113 (25%) |
Ig | <180..222 | CDD:299845 | 18/43 (42%) | ||
IG_like | 257..340 | CDD:214653 | 25/90 (28%) | ||
IGc2 | 264..327 | CDD:197706 | 20/63 (32%) | ||
I-set | 344..430 | CDD:254352 | 27/85 (32%) | ||
Ig | 363..428 | CDD:299845 | 23/64 (36%) | ||
FN3 | 611..703 | CDD:238020 | 22/101 (22%) | ||
FN3 | 711..799 | CDD:238020 | 22/105 (21%) | ||
FN3 | 806..897 | CDD:238020 | 29/96 (30%) | ||
FN3 | 908..989 | CDD:238020 | 21/102 (21%) | ||
FN3 | 1011..1097 | CDD:238020 | 4/18 (22%) | ||
FN3 | 1109..1205 | CDD:238020 | |||
Neogenin_C | 1273..1521 | CDD:284094 | |||
Cntn1 | NP_476459.1 | IgI_1_Contactin-1 | 40..134 | CDD:409436 | 27/113 (24%) |
Ig strand B | 61..65 | CDD:409436 | 2/3 (67%) | ||
Ig strand C | 74..78 | CDD:409436 | 1/4 (25%) | ||
Ig strand E | 96..100 | CDD:409436 | 2/3 (67%) | ||
Ig strand F | 111..116 | CDD:409436 | 2/5 (40%) | ||
Ig strand G | 125..128 | CDD:409436 | 1/2 (50%) | ||
Ig2_Contactin-2-like | 142..230 | CDD:409392 | 29/99 (29%) | ||
Ig strand B | 154..158 | CDD:409392 | 0/3 (0%) | ||
Ig strand C | 169..173 | CDD:409392 | 1/3 (33%) | ||
Ig strand E | 194..198 | CDD:409392 | 2/3 (67%) | ||
Ig strand F | 208..213 | CDD:409392 | 2/4 (50%) | ||
Ig strand G | 224..227 | CDD:409392 | 0/2 (0%) | ||
IgI_3_Contactin-1 | 241..328 | CDD:143259 | 25/91 (27%) | ||
Ig strand B | 259..263 | CDD:143259 | 3/3 (100%) | ||
Ig strand C | 272..276 | CDD:143259 | 1/3 (33%) | ||
Ig strand E | 293..297 | CDD:143259 | 1/3 (33%) | ||
Ig strand F | 307..312 | CDD:143259 | 2/4 (50%) | ||
Ig strand G | 320..323 | CDD:143259 | 0/2 (0%) | ||
Ig | 332..408 | CDD:416386 | 26/84 (31%) | ||
Ig strand A | 332..335 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 339..343 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 347..355 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 361..366 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 368..371 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 374..379 | CDD:409353 | 1/13 (8%) | ||
Ig strand F | 388..395 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 399..408 | CDD:409353 | 3/8 (38%) | ||
Ig5_Contactin-1 | 413..501 | CDD:409438 | 13/88 (15%) | ||
Ig strand B | 432..436 | CDD:409438 | 0/3 (0%) | ||
Ig strand C | 445..449 | CDD:409438 | 0/3 (0%) | ||
Ig strand E | 467..471 | CDD:409438 | 2/4 (50%) | ||
Ig strand F | 481..486 | CDD:409438 | 0/4 (0%) | ||
Ig strand G | 494..497 | CDD:409438 | 0/2 (0%) | ||
Ig6_Contactin | 503..603 | CDD:409359 | 27/143 (19%) | ||
Ig strand B | 522..526 | CDD:409359 | 0/3 (0%) | ||
Ig strand C | 537..541 | CDD:409359 | 1/3 (33%) | ||
Ig strand E | 568..572 | CDD:409359 | 1/3 (33%) | ||
Ig strand F | 582..587 | CDD:409359 | 0/4 (0%) | ||
Ig strand G | 595..598 | CDD:409359 | 1/2 (50%) | ||
FN3 | 612..699 | CDD:238020 | 22/112 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 695..719 | 7/26 (27%) | |||
FN3 | 711..803 | CDD:238020 | 21/99 (21%) | ||
fn3 | 813..895 | CDD:394996 | 28/98 (29%) | ||
FN3 | 907..991 | CDD:238020 | 20/85 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |