DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8569 and zmynd11

DIOPT Version :9

Sequence 1:NP_610795.1 Gene:CG8569 / 36376 FlyBaseID:FBgn0033752 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_001071051.1 Gene:zmynd11 / 553781 ZFINID:ZDB-GENE-050522-301 Length:640 Species:Danio rerio


Alignment Length:659 Identity:143/659 - (21%)
Similarity:225/659 - (34%) Gaps:254/659 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LPSSPIDP----------FCFECHLPGAVKKCISCHRSFHENCQRQDPEKPNYSVPSDKGQPYQF 131
            |||..:.|          :||||||||.|.:|..|.|.:|..|                      
Zfish   103 LPSEALFPDDWGAESHDWYCFECHLPGDVMECDGCFRVYHLRC---------------------- 145

  Fly   132 PVNELDNQPLNNTQNLETPQTPTPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVCEQKGARQ 196
             |:| |::|.:.|.:                                  |...   :|  :|:::
Zfish   146 -VSE-DHRPRDTTSH----------------------------------WQCG---IC--RGSKR 169

  Fly   197 RKLPRIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKY--------SWDQ 253
            :                                       .|:|||:...||:        :.|.
Zfish   170 K---------------------------------------NLNKQEMTTYLKFILGRMKERAVDL 195

  Fly   254 HHSWISMDVAKYMAKHWNERDKALVKRLLFKTKILGLGDIERNIAAAKYTYLTEFLMDLLDLQHN 318
            |             |...|..:.:.|||:...  |.:.:|:.||:..||....||..|...:.||
Zfish   196 H-------------KRGKEAKQPIYKRLIHTP--LDVENIQENISDGKYKSFEEFRADAQLIVHN 245

  Fly   319 MAVFFGQKSVEYNATKWLMRDVTHDIREIRRCPDCYRYSNEASLSDLWFAKPCLQRHELVFAKQV 383
            .|:..|..|.:....:.|..|..|::.|:..|..|:..||  :..|.||..||...||||:|:..
Zfish   246 TAILHGVNSDQTEIARLLYNDTCHELNELMLCRTCFYLSN--ARPDNWFCYPCSPNHELVWARMK 308

  Fly   384 GSPPWPAKVMSVSKRQPIKYDVRFFGGTHSRALISERDITPIESDIQSHIKPRNSRALSAAIKEL 448
            |...||||||   :|:..:.||||||..|.||.|...:|..|...:| .::.:.|.....|..||
Zfish   309 GFGYWPAKVM---QREGNQVDVRFFGHQHQRAWIPSDNIQDITVSVQ-QLQVKRSSGWKKACDEL 369

  Fly   449 QCHMMLSHYSASLFGFHADPT--------------VAENLIKVALSHCTESTETSASGKRGR--- 496
            :.|........:..|...:..              .||:.|. :.|:...........|:.|   
Zfish   370 ELHQRFVREGRTWKGKPEEKNDRSERHERQEERQEEAESSIS-STSNEQSRVNQEPKAKKSRRSQ 433

  Fly   497 --------------------------PPTPATPGAAKNRRLNNTTSNTSSPVP----------IR 525
                                      |..|.....:...:.:::.|::|||.|          ..
Zfish   434 VAEPKEEEPEPEMEAVSSSQEIPTAVPHQPERMSVSTQTKKSSSPSSSSSPAPRMIHKGTQTVNE 498

  Fly   526 GIPDSVAYD------SLTAEILQAHN------------DLL------------------------ 548
            |...::.:|      |...|:::|.|            |.|                        
Zfish   499 GNCQNMCHDKYSKIFSDVKEMMKAENKRETERVLKEALDKLRGEMEEEKRQAVNKAVSSTQAEME 563

  Fly   549 --------NCRRELSATQRK--------LAEVKRKQWCYHCLDEAVFNCCFTASYCSVECQRRD- 596
                    .|:.||....:|        |::.|:|||||:|.:||:::||:..||||::||:.. 
Zfish   564 RKCKQVKEKCKEELMEEMKKMVSQHKQLLSQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHW 628

  Fly   597 KRRHQASCK 605
            ...|:.:|:
Zfish   629 HADHKRTCR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8569NP_610795.1 PHD_SF 85..120 CDD:304600 14/34 (41%)
Bromo_ZMYND11 243..350 CDD:99924 27/114 (24%)
BS69_related 366..451 CDD:99902 34/84 (40%)
zf-MYND 570..604 CDD:280009 14/34 (41%)
zmynd11NP_001071051.1 PHD_BS69 121..164 CDD:277012 20/103 (19%)
Bromo_ZMYND11 177..277 CDD:99924 27/114 (24%)
BS69_related 291..372 CDD:99902 34/84 (40%)
zf-MYND 601..636 CDD:280009 14/34 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593649
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3612
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 205 1.000 Inparanoid score I3703
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183667at33208
OrthoFinder 1 1.000 - - FOG0006060
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107217
Panther 1 1.100 - - LDO PTHR46379
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3824
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.830

Return to query results.
Submit another query.