DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8569 and Zmynd8

DIOPT Version :9

Sequence 1:NP_610795.1 Gene:CG8569 / 36376 FlyBaseID:FBgn0033752 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_006499441.1 Gene:Zmynd8 / 228880 MGIID:1918025 Length:1266 Species:Mus musculus


Alignment Length:583 Identity:119/583 - (20%)
Similarity:193/583 - (33%) Gaps:205/583 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LPSSPIDP---------FCFECHLPGAVKKCISCHRSFHENCQR--QDPEKPNYSVPSDKGQPYQ 130
            |.:.|:|.         :|:.||..|.|..|..|.|.:|..|.|  .:||...:....:|     
Mouse   108 LTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEK----- 167

  Fly   131 FPVNELDNQPLNNTQNLETPQTPTPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVCEQKGAR 195
                      :...:.:||......:|        |:...:..||          |.:.:.|   
Mouse   168 ----------ITVAECIETQSKAMTML--------TIEQLSYLLK----------FAIQKMK--- 201

  Fly   196 QRKLPRIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKYSWDQHHSWISM 260
                             ..|:|             |...|..|             :||     .
Mouse   202 -----------------QPGTD-------------AFQKPVPL-------------EQH-----P 218

  Fly   261 DVAKYMAKHWNERDKALVKRLLFKTKILGLGDIERNIAAAKYTYLTEFLMDLLDLQHNMAVFFGQ 325
            |.|:|                :|..  :.|..:|:|.....|.....||.|...:.||..::.|.
Mouse   219 DYAEY----------------IFHP--MDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGG 265

  Fly   326 KSVEYNATKWLMRDVTHDIREIRRCPDCYRYSNEASLSDLWFAKPCLQRHELVFAKQVGSPPWPA 390
            ........|.:::...|::.||..||:||..:  ....|.||.:||...|.||:||..|.|.|||
Mouse   266 NHKLTQIAKVVIKICEHEMNEIEVCPECYLAA--CQKRDNWFCEPCSNPHPLVWAKLKGFPFWPA 328

  Fly   391 KVMSVSKRQPIKYDVRFFGGTHSRALISERDITPIESDIQSHIKPRNSRALSAAIKEL------- 448
            |.:.....|   .|.||| |.|.||.:...:...:..:|...:|...| ..::|::|:       
Mouse   329 KALRDKDGQ---VDARFF-GQHDRAWVPVNNCYLMSKEIPFSVKKTKS-IFNSAMQEMEVYVENI 388

  Fly   449 --------------------QCHMML--SHYSASL------------FGFHADPTV--AENLI-- 475
                                |..|:|  |:.||..            |...|.|.:  ::.|:  
Mouse   389 RRKFGVFNYSPFRTPYTPNNQYQMLLDPSNPSAGTAKTDKQEKVKLNFDMTASPKILLSKPLLSG 453

  Fly   476 ----KVALSHCTES-TETSASGKRG---------RPP----------------TPATPGAAKNRR 510
                :::||....| |.|::|...|         :.|                :.|:|.:.|..:
Mouse   454 GAGRRISLSDMPRSPTSTNSSVHTGSDVEQDPEKKAPSSHFSASEESMDFLDKSTASPASTKTGQ 518

  Fly   511 LNNTTS-----NTSSPVPIRGIPDSVAYDSLTAEILQAHNDLLNCRRELSATQRKLAEVKRKQ 568
            ..:.:.     :..:|.||...||..: .|.|..||..:.|......:|    ::|:|..::|
Mouse   519 AGSLSGSPKPFSPQAPTPIMTKPDKTS-TSTTGSILNLNLDRSKAEMDL----KELSESVQQQ 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8569NP_610795.1 PHD_SF 85..120 CDD:304600 13/36 (36%)
Bromo_ZMYND11 243..350 CDD:99924 20/106 (19%)
BS69_related 366..451 CDD:99902 30/111 (27%)
zf-MYND 570..604 CDD:280009
Zmynd8XP_006499441.1 TNG2 <30..168 CDD:227367 17/74 (23%)
PHD_PRKCBP1 125..165 CDD:277013 13/39 (33%)
Bromo_RACK7 186..284 CDD:99940 27/176 (15%)
BS69_related 304..384 CDD:99902 29/84 (35%)
DUF3544 453..657 CDD:371877 25/129 (19%)
PTZ00449 <645..800 CDD:185628
ATP-synt_Fo_b <1002..1071 CDD:349951
zf-MYND 1075..1109 CDD:366792
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3824
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.