DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment achi and HMRA2

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_010020.1 Gene:HMRA2 / 850458 SGDID:S000000692 Length:119 Species:Saccharomyces cerevisiae


Alignment Length:136 Identity:37/136 - (27%)
Similarity:57/136 - (41%) Gaps:31/136 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LENEGRGRFHSDSSLDQDSLHADVIVEEDQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGN 99
            :||:     .|:..|.|.:..||.:|         .|.|.  .||         ||.|.:..||:
Yeast     4 IEND-----RSNYQLTQKNKSADGLV---------FNVVT--QDM---------INKSTKPYRGH 43

  Fly   100 -LPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRR-----ILPEMIRR 158
             ..|.:|:||:.|..::..|.|........|.:..:|:.:|:.||..|.||:     |.||:...
Yeast    44 RFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIAPELADL 108

  Fly   159 EGNDPL 164
            ...:||
Yeast   109 LSGEPL 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 10/38 (26%)
HMRA2NP_010020.1 HOX 44..97 CDD:197696 15/52 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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