DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and KNAT3

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_197904.1 Gene:KNAT3 / 832593 AraportID:AT5G25220 Length:431 Species:Arabidopsis thaliana


Alignment Length:166 Identity:51/166 - (30%)
Similarity:72/166 - (43%) Gaps:33/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LDRHVRQN-IQDMMHEAHVQASLLE------NEGRGRFHSDSSLDQDSLHA-------DVI---- 59
            |.:|||.: ::.:|....::.||..      .||.|...||...:|....|       ||:    
plant   241 LQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLDVLGFGP 305

  Fly    60 ---VEEDQSTEHGANQ------VQNYHDMMVDSEHHIDINGSLRKRR-GNLPKTSVKILKRWLYE 114
               .|.::|......|      .|.|.:.:||....|     ||||| |.||..:..:||.|...
plant   306 LIPTESERSLMERVRQELKHELKQGYKEKIVDIREEI-----LRKRRAGKLPGDTTSVLKAWWQS 365

  Fly   115 HRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRR 150
            |....||::.:|..|.||..|.:.|:.|||||.|:|
plant   366 HSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 15/37 (41%)
KNAT3NP_197904.1 KNOX1 160..197 CDD:461051
KNOX2 217..267 CDD:427506 7/25 (28%)
ELK 322..343 CDD:427504 5/25 (20%)
Homeobox_KN 363..401 CDD:428673 15/37 (41%)
Blue background indicates that the domain is not in the aligned region.

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