DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and RPL

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_195823.1 Gene:RPL / 831745 AraportID:AT5G02030 Length:575 Species:Arabidopsis thaliana


Alignment Length:280 Identity:65/280 - (23%)
Similarity:117/280 - (41%) Gaps:61/280 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VEEDQSTEHGANQVQNYHDMM----VDS--------------EHHIDINGSLRKRRGNLPKTSVK 106
            :::.|...|..|. :|..|.:    .||              :||..:   .|..|| ||:.:|.
plant   302 IQQQQQCGHPMNS-ENKTDSLRFGGSDSSRGLCSAGQRHGFPDHHAPV---WRPHRG-LPERAVT 361

  Fly   107 ILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRR 171
            :|:.||::|..:.||:|.:|..|:::..|:..||.|||||||.|:...|:     :.:|...:|:
plant   362 VLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMV-----EEIHMLETRQ 421

  Fly   172 GKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAG--------EIHEGIANVLTNF 228
            .::.|.:..|.......:. |:.::.:|:|.   .|.:..:.:.        ::|.     ..|.
plant   422 SQRSSSSSWRDERTSTTVF-PDNSNNNPSSS---SAQQRPNNSSPPRRARNDDVHG-----TNNN 477

  Fly   229 EQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQSLHSSLQATM-----IDKIKNYQMRKA 288
            ..||...:|.        ..:|.:|:....:|.|:...|.:..:..|:     |...:.:.|..|
plant   478 NSYVNSGSGG--------GSAVGFSYGIGSSNVPVMNSSTNGGVSLTLGLHHQIGLPEPFPMTTA 534

  Fly   289 AAI---GGSAVGSGGAGGSS 305
            ...   |||..|.||..|.:
plant   535 QRFGLDGGSGDGGGGYEGQN 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)
RPLNP_195823.1 POX 165..292 CDD:214728
Homeobox_KN 367..405 CDD:428673 17/37 (46%)
Blue background indicates that the domain is not in the aligned region.

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